Investigation on the Effects of Bactenecin on POPC Membrane in Atomistic Details Using Molecular Dynamics Simulation

Author(s):
Seyran SaeidiSeyran Saeidi1, Elham EsmaeiliElham Esmaeili1, Mohabbat AnsariMohabbat Ansari2, Sajad MoradiSajad Moradi3, Mohsen ShahlaeiMohsen Shahlaei4,*
1Department of Biochemistry, Sanandaj Branch Islamic Azad University, Sanandaj, Iran
2Student Research Committee, Kermanshah University of Medical Sciences, Kermanshah, Iran
3Nano Drug Delivery Research Center, Kermanshah University of Medical Sciences, Kermanshah, Iran
4Medical Biology Research Center, Kermanshah University of Medical Sciences, Kermanshah, Iran
*Corresponding Author: Corresponding author: Medical Biology Research Center, Kermanshah University of Medical Sciences, 67346-67149 Kermanshah, Iran. Email:[email protected]

Journal of Reports in Pharmaceutical Sciences:Vol. 8, issue 1; 13-7
Published online:Jun 30, 2019
Article type:Research Article
How to Cite:Saeidi S, Esmaeili E, Ansari M, Moradi S, Shahlaei M. Investigation on the Effects of Bactenecin on POPC Membrane in Atomistic Details Using Molecular Dynamics Simulation. J Rep Pharm Sci. 2019;8(1):e147422. doi: https://doi.org/10.4103/jrptps.jrptps_45_18

Abstract

Background: Traditional antimicrobial agents are losing their efficiency as microbial resistance increases. Thus, developing antimicrobial peptides (AMPs) can assist as an alternative approach. For AMPs, the hypothesis mode of action is involved in pore formation within the lipid membrane, thereby leading to cell death. In this study, interaction between Bactenecin and 1-palmitoyl-2-oleoylsn- glycero-3-phosphatidylcholine (POPC) was studied. 
Methods: For this purpose, two systems, Bactenecin in water and Bactenecin in POPC were treated by 50 ns of molecular dynamic simulation and data were compared with those of free POPC. 
Results: The results suggest that the interaction between Bactenecin and bilayer membrane cause some disorder and more instability along with little compactness of bilayer. The hydrogen bond between peptide and heads of lipid components may is main reason of membrane compactness. The results can provide some information on how to Bactenecin or other such peptides affect bio-membranes. 
 

Copyright

© 2019, Author(s). This open-access article is available under the Creative Commons Attribution 4.0 (CC BY 4.0) International License (https://creativecommons.org/licenses/by/4.0/), which allows for unrestricted use, distribution, and reproduction in any medium, provided that the original work is properly cited.

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