1. Background
2. Objectives
3. Methods
3.1. Reagents and Standards
3.2. Sample Collection and Preparation
3.3. LC-MS/MS Measurement
3.4. Benchtop FT-NIRS Spectral Collection
3.5. Portable SW-NIRS Spectral Collection
3.6. Multivariate Data Analysis
3.6.1. Principal Component Analysis
3.6.2. Partial Least Squares Discriminant Analysis
3.6.3. Soft Independent Modeling of Class Analogy
4. Results and Discussion
4.1. Citric Acid to Iso-citric Acid Ratio
| No. | Genuine Samples | Adulterated Samples |
|---|---|---|
| 1 | 135 ± 1 | > 1093 |
| 2 | 165 ± 3 | 432 ± 1 |
| 3 | 120 ± 2 | > 958 |
| 4 | 158 ± 1 | 439 ± 2 |
| 5 | 227 ± 2 | 935 ± 2 |
| 6 | 152 ± 3 | 433 ± 2 |
| 7 | 213 ± 1 | > 687 |
| 8 | 171 ± 2 | > 1405 |
| 9 | 166 ± 1 | > 1233 |
| 10 | 155 ± 4 | > 802 |
| 11 | 147 ± 2 | > 1412 |
| 12 | 109 ± 2 | > 1267 |
| 13 | 125 ± 3 | > 863 |
| 14 | 140 ± 2 | > 1460 |
| 15 | 151 ± 2 | > 1253 |
| 16 | 145 ± 2 | > 1258 |
| 17 | > 1407 | |
| 18 | 427 ± 3 | |
| 19 | 333 ± 1 | |
| 20 | 697 ± 2 | |
| 21 | 784 ± 2 | |
| 22 | 655 ± 2 | |
| 23 | > 1462 | |
| 24 | 749 ± 1 | |
| 25 | 445 ± 2 | |
| 26 | > 1472 | |
| 27 | > 1563 | |
| 28 | > 1605 |
a Values are expressed as mean ± SD.
4.2. Spectral Features
The median NIR spectra (solid lines) and the range between minimum and maximum intensity (shaded areas) obtained from lime juice samples in the benchtop FT-NIRS (boxed areas are excluded from further evaluation) (A); and portable SW-NIRS (B); SNV transformed spectra of the samples acquired in benchtop FT-NIRS (C); SNV in combination with second derivative transformed spectra of the samples acquired in portable SW-NIRS (D). FT-NIRS, Fourier-transformation near-infrared spectroscopy; SW-NIRS, short wave near-infrared spectroscopy; SNV, standard normal variate.
4.3. Principal Component Analysis
Principal component analysis score plot of genuine and adulterated samples with PC1, PC2, and PC3 based on the data obtained from benchtop FT-NIRS (A); and portable SW-NIRS (B). Outliers were excluded from the plots. PC, principal component; FT-NIRS, Fourier-transformation near-Infrared spectroscopy; SW-NIRS, short wave near-infrared spectroscopy.
4.4. Partial Least Squares Discriminant Analysis
| Pre-processing (Number of LVs, Explained Variance) | Variables | Benchtop FT-NIRS (%) | Portable SW-NIRS (%) | ||
|---|---|---|---|---|---|
| Internal Validation (Training Set) | External Validation (Test Set) | Internal Validation (Training Set) | External Validation (Test Set) | ||
| Raw data | Sensitivity | 53 | 70 | 41 | 64 |
| FT-NIR (3, 100%) | Specificity | 56 | 83 | 67 | 57 |
| SW-NIR (2, 100%) | Accuracy | 54 | 75 | 50 | 61 |
| AUROC | 0.58 | 0.49 | |||
| Smooth | Sensitivity | 80 | 80 | 41 | 64 |
| FT-NIR (4, 100%) | Specificity | 67 | 86 | 67 | 57 |
| SW-NIR (2, 100%) | Accuracy | 75 | 82 | 50 | 61 |
| AUROC | 0.71 | 0.42 | |||
| 1st derivative | Sensitivity | 73 | 60 | 94 | 100 |
| FT-NIR (3, 99.40%) | Specificity | 67 | 100 | 67 | 100 |
| SW-NIR (4, 99.99%) | Accuracy | 71 | 76 | 85 | 100 |
| AUROC | 0.73 | 0.80 | |||
| 2nd derivative | Sensitivity | 67 | 80 | 81 | 100 |
| FT-NIR (3, 99.40%) | Specificity | 44 | 57 | 56 | 86 |
| SW-NIR (2, 99.89%) | Accuracy | 58 | 71 | 72 | 94 |
| AUROC | 0.59 | 0.82 | |||
| MSC | Sensitivity | 80 | 90 | 94 | 73 |
| FT-NIR (3, 100%) | Specificity | 100 | 100 | 67 | 86 |
| SW-NIR (3, 100%) | Accuracy | 88 | 94 | 85 | 78 |
| AUROC | 0.87 | 0.84 | |||
| SNV | Sensitivity | 80 | 90 | 94 | 73 |
| FT-NIR (3, 99.96%) | Specificity | 100 | 100 | 67 | 86 |
| SW-NIR (3, 99.99%) | Accuracy | 88 | 94 | 85 | 78 |
| AUROC | 0.87 | 0.84 | |||
| SNV + 2nd derivative | Sensitivity | 67 | 70 | 88 | 91 |
| FT-NIR (3, 95.26%) | Specificity | 56 | 57 | 100 | 100 |
| SW-NIR (3, 99.97%) | Accuracy | 63 | 65 | 92 | 94 |
| AUROC | 0.66 | 0.95 | |||
4.5. Soft Independent Modeling of Class Analogy
| Pre-processing (Number of LVs, Explained Variance) | Correctly Assigned Samples (%) | |||
|---|---|---|---|---|
| Training Set | Cross-Validation Set | Adulterated Test Set | Overall Performance | |
| Raw data | ||||
| FT-NIR (2, 100%) | 100 | 100 | 80 | 90 |
| SW-NIR (4, 100%) | 100 | 100 | 75 | 87.5 |
| Auto-scale | ||||
| FT-NIR (3, 100%) | 100 | 100 | 96 | 98 |
| SW-NIR (4, 100%) | 100 | 100 | 89 | 94.5 |
| Smooth | ||||
| FT-NIR (3, 100%) | 100 | 100 | 84 | 92 |
| SW-NIR (3, 100%) | 100 | 100 | 28 | 64 |
| 1st derivative | ||||
| FT-NIR (1, 99.50%) | 100 | 93 | 88 | 90.5 |
| SW-NIR (2, 99.99%) | 100 | 93 | 39 | 66 |
| 2nd derivative | ||||
| FT-NIR (1, 99.50%) | 100 | 93 | 88 | 90.5 |
| SW-NIR (1, 99.40%) | 100 | 93 | 39 | 66 |
| MSC | ||||
| FT-NIR (4, 100%) | 100 | 100 | 80 | 90 |
| SW-NIR (2, 100%) | 100 | 93 | 39 | 66 |
| SNV | ||||
| FT-NIR (4, 100%) | 100 | 100 | 80 | 90 |
| SW-NIR (4, 100%) | 100 | 93 | 89 | 91 |
| SNV + 2nd derivative | ||||
| FT-NIR (1, 98.56%) | 100 | 93 | 16 | 54.5 |
| SW-NIR (2, 99.50%) | 100 | 93 | 0 | 46.5 |


