One of the purposes of root canal therapy is to eliminate bacteria from the root canal system (
1). A common failure in deciduous root canal treatment is the propagation of microorganisms in the sophisticated root canal system, especially the apical or periapical parts of the pulp-treated teeth (
2). The oral cavity hosts numerous bacterial, fungal, and protozoan species (
3). A load of microorganisms in root canals is directly correlated with the duration of microbial exposure in pulp and periapical inflammations. Studies have shown that the severity of pulp and periapical inflammations is directly linked to a load of microorganisms in the root canals and the time of microbial exposure (
4). Hence, root canal treatment aims to eliminate bacterial populations and their products from the canals through mechanical and chemical cleaning procedures (
5). Therefore, appropriate irrigants should overcome such anatomical limitations (
6). Technically, optimal irrigants should exert the best antibacterial effects and the least toxic effects on periapical tissues (
7).
Chlorhexidine gluconate (CHX) (C22H30Cl) is a non-allergic canal irrigant that has strong cationic and antimicrobial characteristics (
7). Although CHX is routinely used as the final irrigant in root canal therapy, it has toxic effects (
8). Natural herbals have been increasingly used in recent years, especially in pharmaceutical companies, due to their strong antimicrobial activities (
9).
Satureja khuzestanica, an herb with more than 90% carvacrol, has potent antimicrobial, anti-inflammatory, and pain-relieving characteristics (
10). This medicinal plant has a significant antibacterial ability due to a wide range of secondary metabolites such as carvacrol, pinene, beta-bisabolene, and coumarin derivatives. Carvacrol and beta-bisabolene are the most effective compounds in biofilm inhibition (
11). Chamomile is another medicinal plant with antimicrobial characteristics (
7). This plant is a widespread short-size flower with white petals and a golden center, including inflorescence as the most valuable part of the flower (
8). Although the exact mechanisms of the antibacterial effects of chamomile have not been well described, they might be linked to the chemically active constituents and α-bisabolol, which is effective at low concentrations on various pathogenic bacteria such as
Escherichia coli,
Staphylococcus aureus,
Bacillus subtilis,
Streptococcus faecalis, and
Pseudomonas aeruginosa, currently resistant bacteria to typical antimicrobial agents (
12). Recent studies have revealed that chamomile can solve digestion problems and relieve the pain of growing deciduous teeth in children (
8). Natural antimicrobials have been increasingly used in recent years due to their relatively low costs and few side effects (
6).