1. Background
2. Objectives
3. Patients and Methods
3.1. Reagents, Cell strains, and Apparatus
3.2. Study Population and Sample Collection
| HCC characteristics | No. (%) |
|---|---|
| Overall patients | 105 |
| Tumor status | |
| T1 | 10 (10) |
| T2 | 31 (30) |
| T3 | 50 (47) |
| T4 | 14 (13) |
| Nodal status | |
| N1 | 24 (23) |
| N2 | 54 (51) |
| N3 | 27 (26) |
| Metastasis | |
| M0 | 63 (60) |
| M1 | 42 (40) |
| Stage | |
| 1 | 10 (10) |
| 2 | 35 (33) |
| 3 | 43 (41) |
| 4 | 17 (16) |
3.3. Recombinant Human YB-1 Protein Preparation
3.3.1. Amplification of the YB-1 Gene by RT-PCR
3.3.2. Expression and Purification of Recombinant YB-1
3.4. Preparation of Antibodies
3.5. Epitope Identification
| Numbers 1-9 | Primers (5’-3’) |
|---|---|
| 1 (18-42aa) | F:GGATCCATGCCCGCCCTCAGCGCC |
| R:CTCGAGTTAGAGGCCGCCCGGGCC | |
| 2 (90-110aa) | F:GGATCCATGGCCATAAAGAAGAAT |
| R:CTCGAGTTACTCCACAGTCTCTCC | |
| 3 (134-160aa) | F:GGATCCATGCAAGGCAGTAAATAT |
| R:CTCGAGTTATTGCTGGTAATTGCG | |
| 4 (162-195aa) | F:GGATCCATGTACCAGAATAGTGAG |
| R:CTCGAGTTAAGGTGGGAACCTTCG | |
| 5 (197-215aa) | F:GGATCCATGTACATGCGGAGACCC |
| R:CTCGAGTTATCCCTGCACAGGAGG | |
| 6 (216-235aa) | F:GGATCCATGGAAGTGATGGAGGGT |
| R:CTCGAGTTACTGCCTCACTGGTCT | |
| 7 (236-265aa) | F:GGATCCATGAATATGTATCGGGGA |
| R:CTCGAGTTATTCTTTATCTTCTTC | |
| 8 (266-303aa) | F:GGATCCATGAATCAAGGAGATGAG |
| R:CTCGAGTTATGTCTCTTTGCCATC | |
| 9 (304-324aa) | F:GGATCCATGAAAGCAGCCGATCCA |
| R:CTCGAGTTACTCAGCCCCGCCCTG |
aUnderlined bases indicate restriction enzymes of BamHI and XhoI, respectively
3.6. SDS-PAGE and Western Blot Analysis
3.7. CLIA Procedure
3.8. Detection of Serum YB-1 and AFP
3.9. Statistical analysis
4. Results
4.1. Expression and Purification of the YB-1 Protein
4.2. Characterization of the Antibodies
Recombinant YB-1 protein and lysates from tumor cells were immunostained with anti-YB-1 PAbs, mAbs 1-D9 and commercial YB-1 mAbs against YB-1. lane 1, recombinant YB-1; lane 2, breast cancer cell MDA-MB-231 lysates; lane 3, hepatic carcinoma cell HepG2 lysates; lane 4, non-small-cell lung cancer cell A549 lysates. Arrows indicated 50kDa YB-1.
4.3. The Epitope of 1-D9
4.4. Performance of the Proposed CLIA
| Concentration of Mixed Serum, μg/L | Intra-Run, n=20 | Inter-Run, n=20 | ||||
|---|---|---|---|---|---|---|
| X¯ | S | CV(%) | X͞ | S | CV(%) | |
| High,32.9 | 32.1 | 1.28 | 4.0 | 32.3 | 2.65 | 8.2 |
| Medium,15.5 | 15.0 | 0.68 | 4.5 | 15.2 | 1.51 | 9.9 |
| Low,5.7 | 5.2 | 0.25 | 4.8 | 5.3 | 0.54 | 10.2 |
4.5. Quantification of Serum YB-1 and Receiver Operating Characteristics (ROC)
4.5.1. Serum YB-1 Concentration
4.5.2. Sensitivity and Accuracy of YB-1 in Combination with AFP
aSensitivity = TP/(TP + FN), where TP = true positive, FN = false negative
bSpecificity = TN/(TN + FP), where TN = true negative, FP = false positive
cAccuracy = (TP + TN)/(TP + FP + TN + FN)
dAbbreviations: AFP, alpha-fetoprotein; HCC, hepatocellular carcinoma







