A 70-year-old Chinese woman, who was diagnosed with ACLF (
1) and decompensated liver cirrhosis, was admitted to our department on 9 November 2018. She underwent a transjugular intrahepatic portosystemic stent shunt (TIPSS) one year ago, and consumed warfarin tablet daily (2.5 mg). Two weeks before her admission in our department, she had spontaneous intracerebral hemorrhage, and then warfarin was withdrawn. After drainage of intracranial hematoma, she stayed in intensive care unit (ICU) for 12 days, and was then transferred to our department because of the liver failure. The patient’s clinical data were obtained during 8 months of follow-up, and the patient signed a written informed consent form as well. This study was approved by the Ethics Committee of the Third People’s Hospital of Changzhou (Changzhou, China), and conducted in accordance with the 1975 Declaration of Helsinki.
The serum total bilirubin (TBIL) level was 308.7 µmol/L at the time of admission, and the international normalized ratio (INR) was 2.56. Entecavir was given due to hepatitis B virus (HBV) DNA-positive (3.5 E+05 IU/mL, Cobas Taqman HBV test, Roche AG, Basel, Switzerland) at the time of admission. The serum level of TBIL ascended to 526 µmol/L on the 14th day after admission, and then gradually declined (
Figure 1A). The INR was maintained above 1.5 for 2 months. In addition, creatinine level significantly increased (from 92.5 to 241 µmol/L) in the first month after admission, while estimated glomerular filtration rate (eGFR) declined to 16.9 mL/min 1.73m
2. Diammonium glycyrrhizinate, plasma, as well as albumin were given intravenously.
At the time of admission, she had sepsis with symptoms, including fever and shivering, and
K. pneumoniae was identified by blood culture test. Biochemical tests showed high levels of procalcitonin (PCT, 14.1 ng/mL) and C-reactive protein (CRP, 33.7 mg/L). Biapenem (0.3 g, q12h) was administered at the time of admission (
Figure 1B). Then, antimicrobial susceptibility testing using VITEK-2 system (bioMerieux, Marcy-l'Étoile, France) showed that
K. pneumoniae isolate was multidrug resistant according to the minimal inhibitory concentrations (MICs, μg/mL) of antibiotics, involving ceftazidime (≥ 64), ceftriaxone (≥ 64), cefepime (≥ 64), cefazolin (≥ 64), cefotetan (≥ 64), cefoperazone-sulbactam (≥ 64), ampicillin (≥ 32), ampicillin-sulbactam (≥ 32), piperacillin-sulbactam (≥ 128), aztreonam (≥ 64), amikacin (≥ 64), macrodantin (≥ 512), meropenem (≥ 16), imipenem (≥ 16), ertapenem (≥ 8), ciprofloxacin (≥ 4) , levofloxacin (≥ 8), tobramycin (≥ 16), Fosfomycin (≥ 16), and tigecycline (≥ 16).
However, clinical manifestations were improved on the second day after biapenem administration. On the 14th day, biapenem was withdrawn according to the normal temperature and PCT. On the 35th day, fever and shivering re-occurred, and K. pneumoniae became positive in blood culture test. Repeated drug susceptibility tests confirmed the same multidrug-resistant K. pneumoniae isolate without extended-spectrum β-lactamases (ESBLs). Biapenem (0.3 g, q12h) combined with moxifloxacin (0.4 g, qd) was shown to be effective, while that couldn’t eliminate the bacteria. The symptoms of sepsis appeared several times through a positive blood culture, and then, combination of meropenem (2 g, q8h) and ertapenem (1 g, q24h) was administered on 22 January 2019. Furthermore, a negative blood culture result was noted, and the symptoms of sepsis disappeared 3 days after combination therapy. Besides, 28 days after combination therapy, a successful treatment outcome was achieved. Three months after admission, the patient recovered without liver transplantation or artificial liver supporting treatment, and she was discharged on 19 February 2019.
Whole genome sequencing of the multidrug resistant K. pneumoniae isolate was performed by Novogene co. LTD (Beijing, China) using single-molecule real-time (SMRT) sequencing. In brief, the reads were filtered by SMRT Link V. 5.0.1 (Pacific Biosciences of California, Inc., Menlo Park, CA, USA), and assembled to generate a single contig without any gaps. The isolate was identified as V113 according to the 7 core genes, including gapA, infB, mdh, pgi, phoE, rpoB, and tonB (https://bigsdb.pasteur.fr/klebsiella/klebsiella.html). In the present V113 isolate, 3 genes (blaPKC, blaTXM, and catA2) on the plasmid and 3 genes (blaSHV2, catB3, and arnA) on the chromosome were identified. Moreover, 10 multidrug resistance efflux pump genes and 2 fosmidomycin efflux pump genes were found on the chromosome. Moreover, comparative genomic analysis of K. pneumoniae with other Klebsiella strains may assist scholars to find out the evolution of the isolate (supplementary file Appendix 1). Phylogenetic tree of K. pneumoniae based on whole genome sequencing showed that the core genome of K. pneumoniae was similar to that of HS11286.
Dynamic changes of biochemical parameters (A) and infectious parameters (B) in a patient with acute-on-chronic liver failure and multidrug-resistant K. pneumoniae V113 isolate infection