The current study aimed to determine the prevalence of hvKp in clinical settings and isolate and characterize bacteriophage against this MDR hvKp as efficient naturally occurring alternative therapeutics. The hvKp is particularly associated with CAIs, and its incidence in clinical settings is increasing; nevertheless, the elevated drug resistance rates in hvKp are mainly associated with mobile genetic elements carrying resistant genes (
8). Worldwide hvKp has been documented as the leading cause of numerous multisystem infections, including pneumonia, hepatic and nonhepatic abscesses, endophthalmitis, meningitis, skin and soft tissue infections, and necrotizing fasciitis (
38). Consequently, the inevitable public health threat that emerged is the confluence of carbapenem resistance class (A and B) with the hypervirulent phenotype of
K. pneumoniae and, more recently, the acquisition of mcr-1 for colistin resistance which is considered the last resort antibiotic against carbapenem-resistant pathogens (
39).
In the current study, out of 50 samples, 22 samples (45%) were detected as
K. pneumoniae. Overall, 11 isolates (50%) of
K. pneumoniae were detected as hvKp; nevertheless, among 14 MDR
K. pneumoniae isolates, 5 isolates (35%) were detected as MDR hvKp. All 5 MDR hvKp isolates (100%) were proven to be susceptible to our isolated bacteriophage. Among the hvKp isolates from various samples, maximum was detected in infected puss; however, only 1 hvKp was detected from tracheal aspirates. This unconventional association of hvKp with nonhepatic abscess is mainly due to the predominant expression of iron acquisition siderophores and polysaccharides (
40). Furthermore, elevated rates of resistance were detected in hvKp isolates. However, previously the majority of hvKp were nonsusceptible to most of the antibiotics in comparison to their counterpart phenotype that largely possesses MDR and XDR isolates (
8).
Aligned to the findings of the present study, recent studies, particularly from China, demonstrated the elevated prevalence of hvKp isolates, particularly resistant to carbapenems and colistin, detected in tertiary healthcare settings (
41). Previously, two bacteriophages were isolated against hvKp, and both phages efficiently lysed hvKp that belonged to capsular serotype K57. However, the bacteriophages did not show any lytic activity against other capsular types indicating a limited host range (
42). In line with the present study’s findings, previously isolated bacteriophage showed a short latent period with a large burst of lytic phage against hvKp (
16).
High resistance levels were determined against every class of antibiotics, including more than 50% resistance to carbapenems (ie, doripenem 63% and 50% resistance rates determined against imipenem). Among cephalosporins, the maximum resistance rate was determined against ceftriaxone (81%) and cefotaxime (77%), followed by cefepime (77%) and ceftazidime (72%). Despite the limited data available for the resistance patterns of colistin, the current study demonstrated more than 22% colistin resistance which is 10 times higher than the previous study for colistin resistance (
43). In this study, resistance ratios to imipenem, ciprofloxacin, and gentamycin were determined as 50%, 54%, and 54% as higher resistance ratios than the same resistance ratios of antibiotic classes recently determined in South Korea as 24%, 24%, and 3.1%, respectively (
44). In contrast to the findings of present study, the lower resistance ratio of quinolones ie, ciprofloxacin and aminoglycosides is particularly due to their structural dissimilarities to cephalosporins.
The resistance patterns of this study are in great comparison to those of a recently conducted study in Pakistan, where maximum resistance was determined in
K. pneumoniae isolates against ceftriaxone (71%). Additionally, nearly 40% resistance was determined against carbapenems, namely meropenem and imipenem. The minimum resistance was determined against colistin which was about 15%; however, 22% colistin resistance was determined in isolates collected in the present study (
45). In comparison to the previous study conducted in Pakistan during 2010, this study reported 50% resistance to carbapenems which means a 50% MDR prevalence ratio, higher than previously noted (
46). An increase in the overall burden of MDR prevalence ratio was also observed in countries, including India and China (
47). The high resistance rates against carbapenems and high prevalence will lead to the usage of last resort beta-lactam monobactam, which in turn increases the resistance against monobactam (aztreonam). This statement can be proven by the recently determined resistant patterns against aztreonam which was the third-highest of the study after cephalosporins and carbapenems (
45).
Hospital wastewater chosen for phage sample collection was inspired by the coevolution of bacteriophages and the associated host bacterium occurring in these environments (
48). The coevolution of host and bacteriophages increases the exposure to different hosts, which in turn could increase the host range of bacteriophages present in such environments (
49). Therefore, this study demonstrated that the sewage waste of hospitals could be a rich source for the isolation of bacteriophages with a broad host range. Such bacteriophages with a broad host range were previously used to treat MDR infections (
50). Out of 22 isolates of
K. pneumoniae, the isolated bacteriophage was active against 16 isolates (72%) of
K. pneumoniae. Among 16 susceptible bacteria, 12 isolates were MDR
K. pneumoniae. In contrast, previously isolated
K. pneumoniae phages KP1513 and KP-34 showed a narrow host range (
51). The most appropriate explanation of the broad host range of the isolated bacteriophage is based on the fact that
K. pneumoniae phages are equipped with multiple depolymerasesthat play a critical role in the polyvalency of a particular bacteriophage (
52).
Other features of the isolated bacteriophage included its adsorption period of 10 minutes and latent period of 25 minutes with a burst time of 55 minutes. This short latent period with a large burst size is a fundamental characteristic of
in vivo phage therapy. The short latent period might allow the bacteriophage to clear the pathogen before the immune response mounted against the phage (
53). The calculated burst size of the bacteriophage was estimated as 230 PFU/cell. The plaque size of the bacteriophage was estimated as 0.5 - 1 mm. The isolation of the bacteriophage with a broad host range requires early enrichment with multiple strains of bacteria. The same approach was adopted in this study to enrich bacteriophages with multiple bacterial isolates as previously hypothesized (
49). Consequently, the isolated phages have shown a broad host range against MDR
K. pneumoniae isolates with 77% activity against MDR isolates. Similar results were also obtained in a recent study on MDR
K. pneumoniae bacteriophages with a 96% host range against carbapenem MDR
K. pneumoniae (
30). However, bacteriophages isolated from Italy and Australia showed narrow host ranges. The bacteriophages vB_Kpn_F48 (MG746602) from Italy and AmPh_EK29 (MN434092) from Australia were only active against strains of sequence type belonging to ST ST101 (
16).
The isolated bacteriophages have shown stability at various ranges of temperature, pH, and chloroform. Similar results to the results of the present study have previously been obtained from bacteriophages that show stability to a wide pH range of 5 - 9 and retained residual activity at pH 3 (
54). In this study, the estimated latent period was 24 minutes with a burst size of 140 phages per cell. However, the recent study showed that the Klebsiella bacteriophage had a latent period of 20 minutes which is in line with this study (latent period: 24 minutes); nevertheless, the burst size of that bacteriophage was 80 PFU/cell (
6). The burst size was 5 times lower than the current study in which the burst size of the bacteriophage was calculated at 190 PFU/cell. One of the possible reasons for the small burst size is the morphology of bacteriophages; large phages usually have small burst sizes (
6). The phage isolated in this study showed a broad host range with a high burst size suggesting that it might be used as an alternative therapeutic against MDR
K. pneumoniae.
5.1. Conclusions
In conclusion, the emergence of MDR hvKp, particularly associated with HAIs and CAIs, demands alternative therapeutic approaches, such as phage therapy. The phage isolated in this study displayed efficient lytic potential with a broad host range. The stability in various environmental factors and short latent periods are the promising characteristics of the isolated phage. In the future, it is suggested to investigate the structural and molecular factors responsible for a broad host range and their potential use to develop engineered bacteriophages against MDR pathogens.