3.1. Patients and Bacterial Isolation
This experimental study was conducted on 150 samples obtained from the buccal and lingual surfaces of the posterior teeth of elementary school students aged 7 - 12 years with the same gender ratio in Gorgan, located in the north of Iran. The samples were collected using a sterile swab and dental floss. The students who used antibiotics within the past three months or had systemic or immunodeficiency disorders were excluded from the study.
The study procedures were performed in accordance with medical ethics standards. The samples were collected and transferred to the laboratory in sterile tubes containing the brain heart infusion (BHI) broth (Merck, Germany) and buffer. After two hours of anaerobic incubation at the temperature of 37°C, the samples were homogenized by vortexing and cultured on blood agar (Merck, Germany) containing 7% defibrinated sheep blood for 24 hours at the temperature of 37°C in anaerobic conditions. Following that, S. mutans was identified based on the colony morphology, gram staining, biochemical tests (hemolysis, catalase, bile esculin, optochin susceptibility, methyl red/Voges-Proskauer, and arginine dihydrolase), and fermentation of mannitol, lactose, salicin, and trehalose. The standard strain of S. mutans PTCC35668 was also used as the control.
3.2. Preparation of the Oregano Essential Oil and MIC Determination
Oregano (Origanum vulgare) was collected from the mountains around Gorgan city in the noetheast of Iran. After the extraction of the oregano leaves, they were mixed, soacked in 70% ethanol at the ratio of 1:10 (each 100 cc of essence soaked in 1,000 cc of ethanol), and placed on a shaker. After 24 hours, the mixture was filtered and placed in a rotary evaporator to evaporate the solvent (ethanol). The maceration method was used to prepare the aqueous essential oil. For this purpose, the filtrate was heated for 15 minutes without boiling, and the mixture was preserved in a container at room temperature to cool. Afterwards, the mixture was filtered through a Whatman no.: 2 filter paper (USA) and stored in a glass container at the temperature of 4°C until use. In addition, a stock solution was prepared from the essential oil of oregano in dimethyl sulfoxide within the concentration range of 4 - 2,048 µL/mL.
The minimum inhibitory concentration (MIC) of the oregano essential oil on the S. mutans isolates was determined using the broth microdilution method. Initially, the serial dilutions were prepared by inoculating 50 microliters of the oregano essential oil into the wells of a 96-well microplate containing 50 microliters of the Mueller Hinton broth. Following that, 50 microliters of S. mutans suspension (0.5 McFarland standard) was inoculated into each well of the microplate. After incubation in anaerobic conditions, the MIC of the essential oil was determined by reading the absorbance at 630 nanometers using an ELISA reader (BioTec, Germany).
3.3. Identification of the Oregano Essential Oil Components
Gas chromatography–mass spectrometry (GC-MS) was used for the identification of the antimicrobial compounds in the oregano essential oil. After the injection of the oregano essential oil into a gas chromatograph and determining the optimal column temperature, the essential oil was diluted with dichloromethane and injected into a GC-MS instrument. Finally, the constituents of the essential oil were determined quantitatively and qualitatively by analyzing the obtained mass spectra, as well as the corresponding chromatograms based on the retention time, Kovats retention index, and comparison of the mass spectra with the standard compounds using the Saturn GC/MS Workstation.
3.4. Biofilm Formation
Biofilm formation by the S. mutans isolates was evaluated using the microtiter plate method. A bacterial suspension equivalent to 0.5 McFarland standard (optical density [OD] of 0.08 - 1 at 625 nm) was prepared in tryptic soy broth (Merck, Germany). To each ELISA well, 100 microliters of the medium was added, along with 50 microliters of the bacterial suspension and 50 microliters of distilled water. The wells containing only the medium were considered as the negative controls. At the next stage, the microplate was incubated at the temperature of 37°C in 5% CO2 for 24 hours. After discarding the supernatant and washing the wells with phosphate buffered saline, the plate was shaken vigourosly in order to remove the unattached bacteria, and the attached bacteria were fixed with 96% ethanol and dried at room temperature. After staining with 2% crystal violet, the plate was examined for the presence of ring-shaped purple stains. Biofilm formation was analyzed by adding 200 microliters of 33% glacial acetic acid to each well and measuring OD at 492 nanometers using an ELISA reader. The OD of lower than 0.1 indicated the absence of biofilm formation, the OD of 0.1 - 0.2 showed weak biofilm formation, the values of 0.2 - 0.3 indicated moderate biofilm formation, and higher OD values than 0.3 showed potent biofilm formation.
3.5. Anti-biofilm Effects of the Oregano Essential Oil
The anti-biofilm effects of the oregano essential oil were evaluated using the modified microtiter plate method. For this purpose, 100 microliters of tryptic soy broth containing 2% dextran was added to the wells of the 96-well microplate. Afterwards, 50 microliters of various concentrations of the oregano essential oil and 50 microliters of the S. mutans suspension were added to each well. The wells containing 200 microliters of the culture medium were considered as the negative controls. The microplate was incubated at the temperature of 37°C for 24 hours, and the bacteria were fixed and stained as mentioned earlier. All the experiments were performed in triplicate.
3.6. In Vivo Experiments
In this study, 18 male NMRI mice with the approximate weight of 30 - 40 grams were purchased from the Pasteur Institute of Iran, Amol branch. The animals were kept in three separate cages at the temperature of 22 ± 3°C within a 12-hour light/dark cycle and had access to food and water ad libitum. The mice were allowed to adapt to the ambient conditions for two weeks. Following that, they were divided into two groups of case (n = 9) and control (n = 9) in order to confirm the biofilm formation by the S. mutans isolates and assess the potential anti-biofilm properties of the oregano essential oil. To suppress the bacterial flora of the oral cavity, the animals received an oral suspension of water and penicillin G (600 units/mL) for four days. In both groups, the suspension of biofilm-producing S. mutans isolates (turbidity: 3 McFarland standard) was rubbed on the animals' teeth using sterile swabs twice per day, along with a sweet diet for 40 days. In the control group, the applied samples were identical to the case group (concentrations equal to the bacterial suspension) with the oregano essential oil (2,048 µL/mL).
In this study, all the tests were performed at a specified time, and the development of dental caries was tracked using a magnifying glass. In addition, the presence of S. mutans in the swab samples obtained from the dental plaques was investigated by gram staining and erythrosine.
3.7. Statistical Analysis
Data analysis was performed in SPSS version 23 using the Kolmogorov-Smirnov test, Kruskal-Wallis test, and one-way analysis of variance (ANOVA) at the significance level of 0.05.