Logo

Evaluation of real time PCR for detection of clinical isolates of Staphylococcus aureus and methicillin-resistance strains based on melting curve analysis method

Author(s):
Narges HeydariNarges Heydari, Mohammad Yousef AlikhaniMohammad Yousef Alikhani, Farid Azizi JalilianFarid Azizi Jalilian, Hamed TahmasebiHamed Tahmasebi, mohammad reza arabestanimohammad reza arabestani,*

Koomesh:Vol. 19, issue 4; 877-886
Published online:Dec 02, 2017
Article type:Research Article
Received:Feb 05, 2017
Accepted:Jul 02, 2017
How to Cite:Narges HeydariMohammad Yousef AlikhaniFarid Azizi JalilianHamed Tahmasebimohammad reza arabestaniEvaluation of real time PCR for detection of clinical isolates of Staphylococcus aureus and methicillin-resistance strains based on melting curve analysis method.koomesh.19(4):e152945.

Abstract

References

  • 1.
    Seyed javadi SS, Alebouyeh M, Nazem Alhosseini Mojarad E, Zali MR. Frequency of class 1 integron and multidrug resistance pattern among isolates of Staphylococcus aureus from hospitalized patients and environmental samples in an intensive care unit in Tahran, Iran. Koomesh 2014; 15: 341-348.
  • 2.
    najar-peerayeh s, jazayeri moghadas a, bakhshi b. Staphylococcus epidermidis virulence factor and ability of macroscopic biofilm production. Koomesh 2016; 17: 918-923.
  • 3.
    Abdal N, Ghaznavirad E, Hamidi A, Hosseini D. Prevalence of genes encoding aminoglycoside resistant in methicillin-sensitive Staphylococcus aurous and coagulase-negative staphylococci isolated from hospital infectious. Koomesh 2014; 16: 82-89.
  • 4.
    Mehta S, Singh C, Plata KB, Chanda PK, Paul A, Riosa S, Rosato RR, Rosato AE. -Lactams Increase the antibacterial activity of daptomycin against clinical methicillin-resistant staphylococcus aureus strains and prevent selection of daptomycin-resistant derivatives. Antimicrob Agents Chemother 2012; 56: 6192-6200.
  • 5.
    Camussone CM, Calvinho LF. [Virulence factors of Staphylococcus aureus associated with intramammary infections in cows: relevance and role as immunogens]. Rev Argent Microbiol 2013; 45: 119-130.
  • 6.
    Poulsen MO, Jacobsen K, Thorsing M, Kristensen NR, Clasen J, Lillebaek EM, et al. Thioridazine potentiates the effect of a beta-lactam antibiotic against Staphylococcus aureus independently of mecA expression. Res Microbiol 2013; 164: 181-188.
  • 7.
    Zarei Koosha R, Mahmoodzadeh Hosseini H, Mehdizadeh Aghdam E, Ghorbani Tajandareh S, Imani Fooladi AA. Distribution of tsst-1 and mecA Genes in Staphylococcus aureus Isolated From Clinical Specimens. Jundishapur J Microbiol 2016; 9: 290-257.
  • 8.
    Bokaeian M, Tahmasebi H. Molecular Identification of genes responsible for resistance to aminoglycosides and methicillin in clinical samples of staphylococcus aureus. J Babol Univ Med Sci 2017; 19: 38-46. (Persian).
  • 9.
    Zeyni B, Arabestani M, YuosefiMashof R, Tahmasebi H. Evaluation of Real-time PCR-based DNA melting method for detection of Enterococcus faecalis and Enterococcus faecium in clinical isolates. J Babol Univ Med Sci 2017; 19: 26-33. (Persian).
  • 10.
    Arabestani MR, Tahmasebi H, Zeyni B. Diagnostic value of melting curve analysis based on multiplex-real time PCR in identification of enterococci species. J Mazandaran Univ Med Sci 2017; 26: 234-247. (Persian).
  • 11.
    Tong SY, Xie S, Richardson LJ, Ballard SA, Dakh F, Grabsch EA, et al. High-resolution melting genotyping of Enterococcus faecium based on multilocus sequence typing derived single nucleotide polymorphisms. PLoS One 2011; 6: 291-89.
  • 12.
    Tong SY, Giffard PM. Microbiological applications of high-resolution melting analysis. J Clin Microbiol 2012; 50: 3418-3421.
  • 13.
    Woksepp H, Jernberg C, Trnberg M, Ryberg A, Brolund A, Nordvall M, et al. High-resolution melting-curve aAnalysis of ligation-mediated real-time PCR for rapid evaluation of an epidemiological outbreak of extended-spectrum-beta-lactamase-producing escherichia coli. J Clin Microbiol 2011; 49: 4032-4039.
  • 14.
    Bokaeian M, Adabi J, Zeyni B, Tahmasebi H. The Presence of aac (6 ') Ie / aph (2 "), aph (3') - IIIa1, ant (4 ') - Ia1 genes and determining methicillin resistance in staphylococcus epidermidis and staphylococcus saprophyticus strains isolated from clinical specimens. Arak Med Univ J 2017; 19: 11-25. (Persian).
  • 15.
    Clinical and Laboratory Standards Institute. Performance standards for antimicrobial susceptibility testing; eighteenth informational supplement. CLSI document M100-18. Wayne, PA: Clinical and Laboratory Standards Institute. 2016.
  • 16.
    Tahmasebi H, Bokaeian M, Adabi J. Coagulase-negative, Beta-lactam, antibiotic resistance, methicillin resistance. Pars Jahrom Univ Med Sci 2016; 14: 55-63. (Persian).
  • 17.
    Wong YP, Chua KH, Thong KL. One-step species-specific high resolution melting analysis for nosocomial bacteria detection. J Microbiol Methods 2014; 107: 133-137.
  • 18.
    Liu Z, Zhang J, Rao S, Sun L, Zhang J, Liu R, et al. Heptaplex PCR melting curve analysis for rapid detection of plasmid-mediated AmpC beta-lactamase genes. J Microbiol Methods 2015; 110: 1-6.
  • 19.
    Xiao XL, Zhang L, & Wu H, Yu YG, Tang YQ, Liu DM, LI XF. Simultaneous Detection of Salmonella, Listeria monocytogenes, and Staphylococcus aureus by Multiplex Real-Time PCR Assays Using High-Resolution Melting. Food Analytical Methods 2014; 7: 1960-1972.
  • 20.
    Forghani F, Wei S, Oh DH. "A rapid multiplex real-time PCR high-resolution melt curve assay for the simultaneous detection of bacillus cereus, Listeria monocytogenes, and staphylococcus aureus in Food." J Food Prot 2016; 79: 810-815.
  • 21.
    Clifford RJ, Milillo M, Prestwood J, Quintero R, Zurawski DV, Kwak YI, et al. " Detection of bacterial 16S rRNA and identification of four clinically important bacteria by real-time PCR." PLoS One 2012; 7: 48558.
  • 22.
    Yam WC, Siu GK, Ho PL, Ng TK, Que TL, Yip KT, et al. Evaluation of the LightCycler methicillin-resistant Staphylococcus aureus (MRSA) advanced test for detection of MRSA nasal colonization. J Clin Microbiol 2013; 51: 2869-2874.
  • 23.
    Bratchikov M, Mauricas M. Development of a multiple-run highresolution melting assay for Salmonella spp. genotyping: HRM application for Salmonella spp. subtyping. Diagn Microbiol Infect Dis 2011; 71: 192-200.
  • 24.
    Wongboot W, Chomvarin C, Engchanil C, Namwat W, Chaimanee P, Tirapattanun A, et al. Application of sybr green real-time quantitative pcr and conventional pcr for the detection of methicillin-resistant staphylococcus aureus in blood samples. Month 2016; 43: 129-134.
  • 25.
    Skow A, Mangold KA, Tajuddin M, Huntington A, Fritz B, Thomson RB, et al. Species-level identification of staphylococcal isolates by real-time PCR and melt curve analysis. J Clin Microbiol 2005; 43: 2876-2880.
  • 26.
    Krawczyk B, Leibner J, Baraska-Rybak W, Samet A, Nowicki R, Kur J. ADSRRS-fingerprinting and PCR MP techniques for studies of intraspecies genetic relatedness in Staphylococcus aureus. J Microbiol Methods 2007; 71: 114-122.
  • 27.
    Robinson D, Enright M. Multilocus sequence typing and the evolution of methicillinresistant Staphylococcus aureus. Clin Microbiol Infect 2004; 10: 92-97.
comments

Leave a comment here

Share on
Metrics

Purchasing Reprints

  • Copyright Clearance Center (CCC) handles bulk orders for article reprints for Brieflands. To place an order for reprints, please click here (   https://www.copyright.com/landing/reprintsinquiryform/ ). Clicking this link will bring you to a CCC request form where you can provide the details of your order. Once complete, please click the ‘Submit Request’ button and CCC’s Reprints Services team will generate a quote for your review.
Search Relations

Author(s):

Related Articles