Antibiotic resistance became a great challenge in public health in the 21st century. In the recent years, the study of antibiotic resistance pattern and distribution of virulence factors among molecular types of MRSA has been an important principle for better understanding of epidemiological and clinical characterization of these bacteria (
16). According to previous studies, MRSA strains have shown a wide pattern of resistance to β-lactams and other therapeutic options, such as macrolides, lincosamides, and aminoglycosides (
2,
5,
16). In line with earlier reports from Iran (
9,
17), Turkey (
18), and Italy (
19), in the present study a high level of resistance to penicillin (97.1%) was found, which can be due to the wide use of beta lactams in hospitals to treat various infections. In the current survey, a high resistance to erythromycin (70.4%) and tetracycline (62.4%) was observed. This finding is largely in accordance with that reported by Rashidi Nezhad et al. (
16), Goudarzi et al. (
5), and Dormanesh et al. (
20). These findings reveal the fact that these antibiotics are used improperly in the treatment of common infections as well as the acquisition of resistance determinants carried by transposons, plasmids or integrons. In addition, resistance rate to aminoglycosides has been investigated by several investigators. Gentamycin is an antibiotic used to treat several types of serious infections, especially staphylococcal infections. The resistance rate to gentamicin was 76% in the present study, which is in line with Goudarzi’s study (2) yet was higher than those reported by Havaei et al. (
21) and lower than that those reported by Wang et al. (
22). The results demonstrated relatively high resistance to kanamycin (84%), amikacin (48%), and tobramycin (46.4%), which is in agreement with earlier rates reported by Ko et al. (
23), Rashidi Nezhad et al. (
16) and also a study conducted by Goudarzi et al. (
2). Antibiotic inactivation by plasmid or transposon-mediated aminoglycoside modifying enzymes (AMEs) is known to be the main mechanism of aminoglycoside resistance. In the present study, 25.6% of MRSA isolates were found to be resistant to mupirocin, among which 10 (31.3%) isolates were confirmed as HLMUPR strains. Various percentages of the mupirocin resistance were reported in MRSA strains isolated from Iran (28.3%) (
5,
24), India (5%) (
25), Jordan (2.6%) (
26), and Greek (1.6%) (
27). Although the main reasons of resistance to mupirocin are not completely clear, high resistance to mupirocin among tested isolates may be due to misuse of mupirocin in the treatment of MRSA skin and soft tissue infections and also eradication of nasal carriage of
S. aureus in health care workers. However, the study population and type of clinical samples should also be considered. In a survey performed on
S. aureus strains isolated from burn patients conducted by Abbasi Montazeri et al. (
28), it was shown that two factors affecting mupirocin resistance among
S. aureus isolates were previous exposure to mupirocin and previous infection by
Pseudomonas aeruginosa. Although isolates of vancomycin-resistant
S. aureus (VRSA) and vancomycin-intermediate
S. aureus (VISA) strains have emerged in many parts of the world, the current results showed that vancomycin, teicoplanin, and linezolid had good activity against
S. aureus isolated from clinical samples. This finding is similar to that of previous studies conducted in Iran (
6), Italy (
19), and Taiwan (
22). These findings highlight the high relevance of proper antibiotic prescription, good surveillance programs, and principles of infection control in health care systems. Generally, these findings suggest a gradual decrease in the vulnerability of
S. aureus to ampicillin, erythromycin, and tetracycline whereas other antibiotics, including vancomycin, teicoplanin, and linezolid have maintained their high efficiency. In a study reported from Iran, resistance rate to trimethoprim-sulfamethoxazole was found to vary between 19.3% and 69% (
2). In the present survey, it was found that 16.8% of MRSA strains were resistant to trimethoprim-sulfamethoxazole.
The results demonstrated that 18 (14.4%) isolates and 50 (56%) isolates had iMLS
B and cMLS
B phenotype, respectively. This finding is similar to those reported by a study conducted in Turkey, which showed that the prevalence rates of iMLS
B, cMLS
B, and MSB phenotype among MRSA strains were 18%, 23%, and 48%, respectively (
29). Low resistance rate of iMLS
B phenotype was detected in many countries such as Canada (35.3%) (26 az rashidi), Iran (4.18%) (24 az rashidi), and USA (7%) (
30), revealing the fact that the incidence of the iMLS
B resistance phenotype varies widely from one region to another. These data suggest that failure to identify iMLS
B phenotype may lead to failure in treatment with clindamycin (
30). In the current study, the frequency of cMLS
B phenotype was found to be higher than that of iMLS
B phenotype; a similar finding was noted previously by Ghanbari et al. (
31).
Hospital-associated MRSA (HA-MRSA) and community-associated MRSA (CA-MRSA) are generally distinguished from each other based on virulence and antibiotic resistance markers (
2). Despite the fact that
pvl carriage cannot be implemented as the only indicator of CA-MRSA, care should be taken to diagnose and treat infections caused by
S. aureus strains harboring the
pvl gene. The current study witnessed a frequency of 20% for
pvl gene, similar to that reported by Goudarzi in Iran (
24).
The most frequent toxin gene in the present study was found to be
tst (67.2%), which is higher than that reported in Colombia (10%) (
32), Malaysia (0.5%) (
33), Sweden (22%) (
34), and Iran (51.4%) (
2).
In the present study, the frequency of eta was 12%, which was close to the rate reported in Czech (10%) (
35) yet higher than the reported rate from Colombia (3%) (
32) and lower than the previous rate reported from Turkey (19.2%) (
36). The frequency rate of
etb gene reported in the present study was relatively low (7.2%), which is in accordance with the results of other studies from Colombia (
32) and Turkey (
36).
It is well established that biofilm formation in
S. aureus is regulated through expression of adhesion-related genes. In the current study, the most prevalent gene was the spa gene (100%) followed by
clfA (94.4%),
clfB (92%),
fnbB (89.6%),
fnbA (83.2%),
ebp (58.4%), can (44.8%), and
bbp (3.2%) genes. Similar findings on the frequency of
clfA and
clfB genes were reported by Ghasemian et al. (
13), who reported high prevalence of
clfA and
clfB genes in comparison to other investigated adhesions. In the present study, the frequency of
fnbA and
fnbB genes were relatively high (
13), similar to previous studies, emphasizing the important role these genes in MRSA colonization. The obtained results in present study about frequency of
ebp (58.4%) and can (44.8%) encoding genes are, however, in contrast with those reported by Ghasemian et al. (
13), who reported a frequency rate of 78% and 7%, respectively, for can and
ebps genes in MRSA isolates. The existing difference in the frequencies of can and
ebps genes in MRSA isolates may be justified in terms of clinical isolates and factors affecting gene regulation, which can have a role in the prevalence of these genes for colonization.
As for the frequency of
agr specificity groups, the present study showed that the majority of tested isolates belonged to
agr type I (52%). Indrawattana et al. (
37) reported high frequency of
agr type I (58.7%) among
S. aureus isolated from clinical isolates. One study performed by Goudarzi et al. (
5) in Iran showed
agr type I as the dominant
agr type among MRSA isolates. In contrast to the findings of the present study, showing that all the isolates carrying PVL-encoding genes and HLMUPR were associated with this
agr type I, Goudarzi et al. (
5) showed that PVL-positive isolates belonged to
agr type III. The
agr group III was the second most-common
agr type identified in this study (34.4%). These findings are in line with those of previous reports about the predominance of
agr III in Iran (
5). In conformity with the results of the present study, low frequency of
agr group II and
agr group IV was reported in studies conducted by Ben Ayed et al. (
38) and Ghasemian et al. (
39). The frequency of toxin and adhesive molecule-encoding genes in isolates with
agr type I was found to be higher than that for type III in the present study, which is in line with the results reported by other studies in various areas (
40). Also, distribution of
agr types is known to vary between geographic regions. This research also found that all toxin and adhesion genes were more prevalent in isolates with
agr type I, a finding, which was previously shown by Nowrouzian et al. (
34), reporting high frequency of sea and
tst genes in MRSA isolates harboring the
agr type III. The body of these findings help hypothesize that
agr type I can have an indispensible role in the regulation of staphylococcal toxins and adhesions.
To summarize, this research investigated toxin and adhesion markers in S. aureus isolated from hospitalized patients at ICUs. The results of the current study showed that agr type I was predominant among tested isolates with high frequency of toxin and adhesion genes. The high frequency of agr type I in this study may reflect the indispensible role of this type in regulation of staphylococcal toxins and adhesions. To appreciate the prevalence and epidemiology of adhesion and toxin genes in different molecular types of S. aureus, ongoing surveillance and further studies are necessary.