Bile acids play crucial roles in fat digestion, cholesterol metabolism, and gut microbiota regulation. The gut microbiota converts primary bile acids into secondary bile acids, and nearly 95% of bile acids undergo enterohepatic circulation, recycling via the portal vein to the liver (
7). This cycle is essential for maintaining intestinal microbial homeostasis and preventing dysbiosis (
8). Disruption of the gut microbiota alters bile acid metabolism, affecting its composition and quantity (
9). The bile acid receptor FXR is expressed in various tissues, with the liver and ileum being the most studied organs. Research has found that FXR, a bile acid receptor, regulates bile acid synthesis by inducing intestinal FGF19, which inhibits hepatic cholesterol 7α-hydroxylase activity (
10,
11). Bile acids possess antimicrobial activity and can inhibit the growth of intestinal bacteria, thereby reshaping the gut microbial community. Bile duct ligation leads to gut microbiota dysbiosis, whereas FXR agonists can maintain the integrity of the intestinal barrier in bile duct-ligated mice and alleviate liver injury (
12,
13).
The gut microbiota and bile acids engage in a bidirectional relationship: The microbiota regulate bile acid metabolism via the FXR-FGF19 axis, while bile acids reciprocally shape the microbial composition by promoting bile acid-metabolizing bacteria and suppressing sensitive species, thereby maintaining homeostasis (
Figure 2) (
14-
17). The amphiphilic nature of bile acids allows them to directly exert antimicrobial effects by disrupting bacterial cell membranes, which is crucial for maintaining microbial homeostasis. Studies have found that bile duct ligation for one week can induce bacterial translocation to the mesenteric lymph nodes in rats, and after three weeks, bacterial translocation expands to tissues such as the liver, spleen, and lungs. Concurrently, the number of gram-negative bacteria in the cecum and the level of endotoxins in the blood significantly increased, with flattening of the villi in the distal ileum and enlargement of Peyer's patches (
18). Oral administration of bile acids effectively inhibits small intestinal bacterial overgrowth, bacterial translocation, and endotoxemia (
19). Secondary bile acids can inhibit the growth of
Clostridium difficile, a well-known pathogenic bacterium, thereby resisting infections caused by this bacterium (
20). Bile acids can enrich bacteria that can utilize bile acids. For example, bacteria with bile salt hydrolase activity, such as
Lactobacillus, can resist the cytotoxicity of bile salts (
21). In vitro culture experiments have shown that the growth of
Bilophila wadsworthia requires bile acids (
22). Studies have found that a diet rich in milk fat can alter the bile acid composition profile, primarily manifested by an increase in taurocholic acid (TCA) levels, and the abundance of
B. wadsworthia also increases accordingly (
23). In IL-10 knockout mice, oral administration of TCA in a regular diet can promote the growth of
B. wadsworthia, and the abundance of this bacterium is associated with the severity of colitis in IL-10 knockout mutant mice (
17). This demonstrates that the interaction between bile acids and the microbiota can influence host metabolism. Patients with alcoholic liver disease exhibit changes in the composition and size of the bile acid pool by upregulating bile acid synthesis genes, altering bile acid conjugation enzymes, and modulating bile acid transporters (
24). Conversely, dysbiosis of the gut microbiota associated with echinococcosis affects bile acid metabolism, which may be related to the pathogenesis of HAE. In summary, the gut microbiota modulates bile acid metabolism and synthesis through the FXR-FGF19 signaling axis, whereas the homeostatic enterohepatic circulation of bile acids reciprocally stabilizes the gut microbial ecosystem. Dysregulation of either component establishes a pathogenic bidirectional loop that drives the initiation and progression of HAE.