The conducted review will be presented based on the PRISMA statement (
12). The PRISMA flowchart will be used to explain the number of initial studies (included and deleted) at the various stages of this systematic review (Appendix 2 in Supplementary File).
2.1. Patient and Public Involvement
This is a protocol for previously published articles; thus, patients or public and related data are not necessary to be assessed or included in any section of this protocol development.
2.2. Criteria
All articles related to TLR9 expression, AD dementia, mild cognitive impairment (MCI), and subjective cognitive decline (SCD), which were available and published on mentioned searched databases before June 15 2020, will be collected. The inclusion and exclusion criteria are provided in the following sections.
2.3. Population
Adult patients with dementia due to AD will be included. Other cognitive disorders due to alcohol consumption or drug abuse, central nervous system (CNS) injuries like subdural hematoma, tumor, or infection, as well as other neurological complications such as Huntington’s disease or Parkinson’s disease, will be excluded.
2.4. Comparator
The control group will consist of healthy old adults. Those with cognitive impairments, neurocognitive complications, and disrupted daily functions will be excluded.
2.5. Outcomes
We will only consider quantitative measurements.
2.6. Study Type
The observational studies, including cross-sectional or case-control and cohort studies that investigated TLR9 and AD in human studies, will be included.
There will be no language restrictions during the papers’ searching. All papers should be studies published in peer-reviewed journals.
2.7. Information Sources
The following databases will be searched for relevant studies, published between January 1, 1990, and June 15, 2020, with no language restrictions: PubMed/MEDLINE, Web of Science, Embase, Scopus, CINAHL, Cochrane, and Google Scholar. The search strategy syntax will be altered to be used in the mentioned databases. In final analyses, the searches will be performed again, and any new study will be considered for inclusion. Also, case reports, reviews, editorials, letters, and case series articles will be removed. To do so, a search utilizing the keywords “Alzheimer’s disease” and “toll-like receptor9” will be performed. An example of a conducted PubMed search strategy is provided in Appendix 3 in Supplementary File. It should be noted that search syntax will be adjusted in accordance with the used databases. The search terms will be found both in EMBASE (EMTREE) and in MEDLINE/PubMed (Medical Subject Headings/MeSH), and a combination of these terms will be used to produce an appropriate electronic search strategy. The titles, abstracts, and keywords of the studies will be considered. Grey literature will be collected using Google Scholar, Open Grey, ClinicalTrials.gov, and the International Clinical Trials Registry Platform. Unpublished studies, including conference papers, scientific meetings, or theses, will be included in the search to mitigate publication bias. We will also contact the authors of these eligible conference papers through emails, and we will ask them for full texts, if necessary.
2.8. Search Strategy
To make the search strategy highly sensitive, in final analyses, the searches will be performed again, and any new study will be considered for inclusion. The searches will be performed in titles, abstracts, and full-texts. A dual independent review will be carried out to the search strategy. This will also be used to minimize random errors and bias for the studies’ identification and assessment processes. The independent librarian will recheck the search strategy.
2.9. Data Management
Data management will be conducted using the EndNote software version X7. One of the researchers (Z.F.) will import the search results for each database into the EndNote library, will remove the duplicate records of each database into the EndNote library, and then will remove the duplicate records.
2.10. Study Selection
The three-step model will be used for the inclusion of proper studies in the present review. The first step will be to examine the relevance of the titles and abstracts of the selected papers. Articles without abstracts or incomplete abstracts will be considered for full-text analysis. In the next step, studies with eligibility for our study will be checked by two researchers (N.H. and S.N.) separately. In the final step, full texts will be assessed by reviewers to reveal their relevance. To resolve any existing disagreement, the third reviewer (F.K.), who is experienced in this field, will be consulted. The reasons for the exclusion of the studies will be recorded at each stage. The researcher (Z.F.) will perform the search, review, and initial selection of articles based on the search strategy and in accordance with the PRISMA-P statement simultaneously (
13), and will save the results of each database, separately. For each database, duplicates will be determined, and newly found cases will also be chosen and saved. Then, two researchers (S.N. and N.H.) will review the final list of references for all selected articles and grey literature to individualize other relevant articles.
2.11. Data Extraction
A form will be prepared for data extraction, and two reviewers (N.H. and S.N.) will evaluate and extract data independently.
The data extraction from the screened papers will include the following:
1) Study characteristics such as paper ID, publication date, the first author’s name, country, publication language, setting locations, study design, sample selection criteria, sample size, diagnostic criteria, and measured outcomes.
2) General characteristics of participants, including gender, age, and ethnicity: The missing data will be asked from the corresponding author through email. The included studies will be categorized based on the outcome data and the clinical examination by which the participants are diagnosed. If there is any disagreement on the inclusion of a study, the third reviewer will resolve it. Also, all reasons for the exclusion of a study will be explained in a documented table.
If the data presented in the research report are incomplete, the researchers will contact the corresponding author for more information to manage the data in specific circumstances, determined by the Cochrane Institute. If the authors do not respond to the first email, we will send up to three reminder emails. After sending three reminder emails, if we do not receive any answer, the reviewers will consider the incomplete information as missing data.
2.12. Quality Assessment
The included papers will be analyzed for reliability or internal validity to specify the risk of bias, including selection bias, performance bias, detection bias, attrition bias, analysis bias, and reporting bias.
Two reviewers (S.N. and N.H.) will evaluate the methodological quality of primary studies independently by the Joanna Briggs Institute (JBI; 2018) Critical Appraisal Checklist for Analytical Cross-Sectional studies. Also, case-control and cohort studies will be assessed by other developed tools; if necessary, this will be implemented for all included studies to evaluate the study quality. In case of uncertainty or disagreement between the reviewers, an independent reviewer (L.J.) will be conferred through dialogue to gain consensus. The publication bias will be evaluated by funnel plots (study results against accuracy plots) and Begg’s and Egger’s tests.
2.13. Meta-analytic Approach
Heterogeneity will be assessed to detect the scale variation for effect estimate caused by heterogeneity instead of chance. The heterogeneity in primary studies will be evaluated by χ2 test (at the level of 10% will be considered as significant) and I2 statistic (50% - 90% will show significant heterogeneity). The synthesized effect size will be presented in the form of the standard mean differences with 95% CI. If the model of heterogeneity provides meta-analysis permission, a random-effects model will be used. Therefore, meta-analysis will be structured using the Comprehensive Meta-Analysis (CMA V.3, Biostat, Englewood, USA). The standard mean differences represent the differences between the means of two groups divided by the standard deviation (SD). For the meta-analysis, the data will be presented as continuous outcomes and the random-effects model will be used for the variations of exciting methodology between studies. Moreover, the reason for high levels of heterogeneity will be determined. If we succeed in finding the sources of heterogeneity, we will use subgroup analysis to present pooled results in the relevant subgroups. The results will be considered as significant for p-values < 0.05.