In this Descriptive study, sampling was done during surgery of 3 women who had a positive HPV PCR test with genital lesions and suspected cervical cancer who had referred to Al-Zahra Hospital, Rasht during first six months of 2011, at the same time, sampling of healthy part of the tissue was done which was used as control after confirmation by pathology laboratory. In order to eliminate confounding parameters, healthy and cancerous tissue was obtained from patients in each sampling. Cervical cancer was confirmed by pathologist and Gynecologist.
For protein extraction, frozen healthy and cancerous tissues of patients under liquid nitrogen condition were powdered completely. The resulting powder with lubricating buffer containing Tris-Hcl, magnesium chloride, EDTA and phenyl methyl sulfonyl fluoride (PMSF) and 5 mM beta-mercaptoethanol, 0.5% CHAPS, and 10% glycerol was kept in ice for 30 minutes. Then, the solution was centrifuged in 16,000 G round at 4°C for 30 minutes and protein assay was performed by Bradford technique [
11].
For a two-dimensional electrophoresis, the sample was washed three times with PBS buffer and placed in 300 microliters of lubricating buffer (7 M urea, 2 M Thurea urea, 4% (CHAPS), 0.2 -0.3 DTT, 1% - 2% Ampholine with 3-10 Ph) and was shaken for an hour in room temperature. Then, the lysed solution was centrifuged by 10,000 Ground. The solution was maintained in 20°C. In order to test the accuracy, for each healthy and ill case, it was repeated 3 times. Dry Strip was placed in the buffer for a single night to be dewatered. Sample was also taken during the dewatering. Then, based on (Bio-rad) IEF-IPG system, two-dimensional electrophoresis was performed. Next, gels were placed in balancing buffer for second level of electrophoresis. Strip was placed on the second level gel with and was fixed with 0.5% Agarose in electrophoresis buffer containing SDS (25 mM Tris, 192 mM glycine, 0.1% SDS), then started to work vertically.
For protein staining by Coomassie Blue stain, following electrophoresis gel was placed for 6 hours in a solution of 40% methanol, 10% acetic acid and 0.025% Coomassie color which is filtered by using Whatman paper filter. Gel was placed in bleaching solution continuously until the discoloring of the entire field.
Analysis of image spots (proteins) which appeared on the gel was done based on following steps: scanning the gel image, identifying protein spots and quantifying (evaluating the color intensity of spot), matching gels, data analysis, data interpretation and finally creation of two-dimensional electrophoresis databases [
12].
Statistical analysis: Because descriptive essay. We compared and statistical tests does not make sense.
Ethical considerations: Objectives of the study were explained in plain language for patients and written consent was obtained from them. Patient information is kept confidential and test if she was willing to inform. Examples of scientific information relevant to the study variables, without restriction of any kind, patient characteristics, and only by a proprietary code was used and was archived as normal.
Clinical trial registration: This thesis is executed by Azad Islamic University of Tonekabon. The authors hereby express their special thanks to Research department of this university for approving this project on October 7, 2010. This study is extracted from an MSc thesis of the same university.