For the generation of the recombinant gene construct encoding HLA class-I (human leukocyte antigen class-I) restricted CTL epitopes, the immunogenicity of different epitops of HPV-16 E7 (49 - 57), E6 (41 - 50, 81 - 90, 98 - 107) and L1 (165 - 173) linked by a spacer of (glutamic acid, alanine, alanine, alanine, lysine) were assessed and optimized using computer-based modeling. Kozak sequence with the start codon (ACCATG) was added at the 5’-end of the DNA sequence. At both sides of sequence, two restricted enzyme sites (
XhoI and
BamHI) were predicted. Also, a stop codon (TAG) was added at the 3’-end of target sequences. The final DNA sequences were designed and synthesized. Artificial gene sequences encoding target immunogenic epitopes of E6, E7 and L1 create 397 bp. The scheme of recombinant DNA construct produced in this study has been shown in
Figure 1. Validity of synthesized sequences was confirmed using automated sequencing. The construct was subcloned into pIRES and named as pIRES-E6/E7/L1.