Molecular Modeling Studies
Spatial interaction in FAAH active site was simulated using AutoDock 4.0 software (Lamarckian genetic algorithm) to predict the interaction of the synthesized compounds. The high-resolution crystal structure of FAAH with OL-135 as a ligand was retrieved from RCSB Protein Data Bank (PDB code: 3PPM). The structure of the enzyme was assumed to be rigid, and the ligands were considered flexible and polar hydrogens and Kollman united atom partial charges were added. The HyperChem 8 software was used for energy minimization of each structure under MM + method and AutoDockTools 4.0 version 1.5.6rc3 to render pdbqt format. A docking grid box was built with 40, 40, and 40 points in the catalytic site of protein and the number of generations and maximum number of energy evaluations was set to 100 and 2,700,000, respectively. The docking results were clustered with RMSD = 0.5 Å and evaluated by Pymol software (
12).
Chemistry
All chemicals and solvents were purchased from Merck Company and used without further purification. TLC was performed on commercially available Merck plates (silica gel 60 F254, 0.25 mm). Electrothermal 9100 apparatus was used to measure uncorrected melting points. Infrared spectra were obtained on a Perkin Elmer 843 spectrometer. A Bruker FT-400 MHz instrument (Bruker Biosciences, USA) was used to obtain 1HNMR and 13CNMR spectra in DMSO d6, using TMS as an internal standard. Chemical shifts were stated as ppm against TMS as the internal standard. Coupling constant (J) increments are estimated in hertz (Hz) and spin multiples are shown as “s” for “singlet”, “d” for “doublet”, “t” for “triplet”, “q” for the “quartet”, “m” for “multiplet”, and “br” for “broad” signal. LC Mass spectra and elemental analysis were achieved by HPLC Agilent system and Costech elemental analyzer respectively.
Ethyl 4-aminobenzoate (2)
To 4-aminobenzoic acid 1 (13.7 g, 0.1 mol) in ethanol (100 mL), 10 mL of concentrated sulfuric acid was added and the mixture was refluxed for 12 h. The resulting mixture was concentrated under vacuum and then poured into 200 mL of water. The resulting solution was slowly neutralized to pH 8 using solution of potassium carbonate. The final solid was separated and slowly washed with water (100) and finally dried in a vacuum (
13). Yield 90%, m.p: 90-92 °C, IR (KBr) ν (cm-1) 3100-3500 (NH2), 1630 (C = O), LC-MS (ESI) m/z 166 (M + H).
General procedure for the synthesis of the esters 3a-3b
To the suspension of ethyl 4-aminobenzoate
2 (0.66 g, 4 mmol) in DCM (10 m, 0 °C), DIPEA (0.59 g, 0.8 mL) was added. Then 4.4 mmol of benzoyl halide was added and stirred for 12 h at room temperature. DCM (50 mL) was added to the mixture to obtain a clear solution. The resulting organic phase was washed twice with HCl (50 mL, 2 M). The collected organic phase was dried over anhydrous sodium sulfate and evaporated under vacuum to give a crystalline product (
14).
Ethyl 4-benzamidobenzoate (3a)
Yield 92%, m.p: 149-150 °C, IR (KBr) ν (cm-1) 3300 (NH), 1700 (C = O), 1650 (C = O), 1200-1400 (Ar), LC-MS (ESI) m/z 268 (M-H).
Ethyl 4-(4-chlorobenzamido) benzoate (3b)
Yield 95%, m.p: 173-75 °C, IR (KBr) ν (cm-1) 3300 (NH), 1700, 1650 (C = O), 1200-1400 (Ar), LC-MS (ESI) m/z 302 (M-H).
General procedure for the synthesis of the hydrazide 4a-4b, 6
Benzoate ethyl ester
2 or
3a-3b (5 mmol) and hydrazine hydrate (20 mmol) were melted (110 °C, 90 min) in a closed container. Recrystallization from EtOH yielded intermediate hydrazide (
15).
N-(4-(hydrazinecarbonyl) phenyl) benzamide (4a)
Yield 65%, m.p: 321-324 °C, IR (KBr) ν (cm-1) 3300-3200 (NH, NH2), 1670, 1650 (C = O), LC-MS (ESI) m/z 256 (M+H).
4-chloro-N-(4-(hydrazinecarbonyl) phenyl) benzamide (4b)
Yield 55%, m.p: 335-340 °C, IR (KBr) ν (cm-1) 3300-3200 (NH, NH2), 1670, 1650 (C = O), LC-MS (ESI) m/z 290 (M+H).
4-aminobenzohydrazide (6)
Yield 85%, m.p: 225-228 °C, IR (KBr) ν (cm-1) 3400-3100 (NH, NH2), 1670 (C = O), LC-MS (ESI) m/z 152 (M+H).
General procedure for the synthesis of the compounds 5a, 5b, 7
The intermediate hydrazide compounds
6 or
4a-4b (1 mmol) in cold methanol (3-5 mL, 5 °C) and in the presence of acetic acid (0.24 g, 4 mmol) were stirred at room temperature for 15 min. Potassium cyanate (0.324 g, 4 mmol) was added within 15min. Then put the lid and continue to stir for 24 h at room temperature. Water (2 mL) was added to the reaction vessel and the resulting white precipitate was separated and washed with warm water (10 mL, 50 °C) (
14).
2-(4-benzamidobenzoyl) hydrazine-1-carboxamide (5a)
Yield: 56%, m.p: 283-285 °C, IR (KBr) ν (cm-1) 3350-3000 (NH, NH2), 1750-1650 (C = O), 1200-1400 (Ar). 1H NMR (400 MHz, DMSO) δppm 10.51 (s, 1H, NH), 10.09 (s, 1H, NH), 8.01–7.95 (m, 2H, H2, H6-phenylene), 7.94–7.84 (m, 4H, H-benzoyl, NH), 7.66–7.51 (m, 4H, phenyl, H3, H5-phenylene), 6.05 (s, 2H, NH2).13C NMR (101 MHz, DMSO) δppm 166.35, 166.26, 142.64, 135.16, 132.28, 128.92, 128.79, 128.23, 128.11, 119.94, 119.82. LC-MS (ESI) m/z 299 (M + H). Anal.Calcd for C15H14N4O3: C, 60.40; H, 4.73; N, 18.78. Found: C, 60.34; H, 4.70; N, 18.92.
2-(4-(4-chlorobenzamido) benzoyl) hydrazine-1-carboxamide (5b)
Yield: 59%, m.p: 325-327 °C, IR (KBr) ν (cm-1) 3350-3000 (NH, NH2), 1750-1650 (C = O), 1200-1400 (Ar). 1H NMR (400 MHz, DMSO) δppm 10.58 (s, 1H, NH), 10.08 (s, 1H, NH), 8.05–7.95 (d, J = 8.4 Hz, 2H, H2, H6-phenylene), 7.93–7.82 (m, 5H, -phenylene, NH), 7.65–7.57 (d, J = 8.4 Hz, 2H, H3, H5-phenylene), 6.05 (s, 2H, NH2 ).13C NMR (101 MHz, DMSO) δppm 166.45, 165.42, 142.37, 137.18, 133.73, 130.17, 129.03, 128.81, 128.31, 128.14, 120.17, 120.01. LC-MS (ESI) m/z 333 (M + H), 355 (M + Na). Anal.Calcd for C15H13ClN4O3: C, 54.15; H, 3.94; N, 16.84. Found: C, 54.22; H, 3.91; N, 16.80.
2-(4-ureidobenzoyl) hydrazine-1-carboxamide (7)
Yield: 45%, m.p: 226-228 °C (dc), IR (KBr) ν (cm-1) 3500-3000(NH, NH2), 1700-1600 (C = O), 1200-1400(Ar). 1H NMR (400 MHz, DMSO) δppm 9.95 (s, 1H, NH), 8.84 (s, 1H, NH), 7.79 (d, J = 8.4 Hz, 2H, H2, H6-phenylene), 7.72 (s, 1H, NH-urea), 7.47 (d, J = 8.4 Hz, 2H, H3, H5-phenylene), 6.02 (s, 2H, NH2), 5.69 (s, 2H, NH2). 13C NMR (101 MHz, DMSO) δppm 166.83, 156.22, 152.48, 144.18, 129.61, 125.42, 119.64. LC-MS (ESI) m/z 236 (M-H). Anal.Calcd for C9H11N5O3: C, 45.57; H, 4.67; N, 29.52. Found: C, 45.48; H, 4.70; N, 29.56.
General procedure for the synthesis of the compounds 8, 9
Method a: Para-aminobenzohydrazide 6 (0.151g, 1 mmol) was refluxed with succinic anhydride or phthalic anhydride (2.02 mmol) in pyridine (5 mL) for 72 h. Cold water (50 mL) was added and the reaction was acidified with concentrated HCl. The resulting precipitate was filtered off and washed with water.
Method b: an effective alternative method was to melt the reactant mixture at 140 °C for 4 h. The resulting raw product was recrystallized from ethyl acetate and, if necessary, purified by a short column of silica gel and mobile phase of Hexane: chloroform (20: 80).
N, 4-bis (1,3-dioxoisoindolin-2-yl) benzamide (8)
Yield: 75%, m.p: 316-318 °C, IR (KBr) ν (cm-1) 3350 (NH), 1750-1650 (C = O), 1400-1100 (Ar). 1H NMR (400 MHz, DMSO) δppm 11.47 (s, 1H, NH), 8.12 (d, J = 8 Hz, 2H, H2, H6-phenylene), 8.08 – 7.08 (m, 8H, 2 phthalimide), 7.68 (d, J = 8 Hz, 2H, H3, H5-phenylene). 13C NMR (101 MHz, DMSO) δppm 167.14, 166.27, 165.81, 136.62, 135.96, 135.80, 135.36, 130.38, 130.09, 130.02, 129.96, 127.75, 124.42, 124.23, 124.07. LC-MS (ESI) m/z 410 (M-H). Anal.Calcd for C23H13N3O5: C, 67.15; H, 3.19; N, 10.21. Found: C, 67.11; H, 3.21; N, 10.25.
N, 4-bis (2,5-dioxopyrrolidin-1-yl) benzamide(9)
Yield: 48%, m.p: 273-275 °C, IR (KBr) ν (cm-1) 3350 (NH), 1750-1650 (C = O), 1400-1100 (Ar). 1H NMR (400 MHz, DMSO) δppm 9.56 (s, 1H, NH), 7.88 (d, J = 8.8 Hz, 2H, H2, H6-phenylene), 7.14 (d, J = 8.8 Hz, 2H, H3, H5-phenylene), 2.42 (m, 8H, 2 succinimide). 13C NMR (101 MHz, DMSO) δppm 174.05, 167.33, 143.40, 131.42, 130.16, 125.39, 123.85, 130.29, 29.24. LC-MS (ESI) m/z 314 (M-H). Anal.Calcd for C15H13N3O5: C, 57.14; H, 4.16; N, 13.33. Found: C, 57.20; H, 4.12; N, 13.30.
General procedure for the synthesis of the compounds 10a-10f
Para-aminobenzohydrazide 6 (0.151 g, 1 mmol) with the proper acyl halides (2.02 mmol) was stirred in pyridine (5 mL) for 24 h. The reaction mixture was poured into 30 mL of distilled water, stirred for 5 min and acidified with concentrated HCl. The final product was recrystallized from EtOH.
N-(4-(2-benzoylhydrazine-1-carbonyl) phenyl) benzamide (10a)
Yield: 65%, m.p: 265-267 °C, IR (KBr) ν (cm-1) 3350-3100 (NH), 1750-1650 (C = O), 1200-1400 (Ar) 1H NMR (400 MHz, DMSO) δppm 10.56–10.44 (m, 3H, 3 NH), 8.02–7.91 (m, 8H, H2, H6-benzoyl, H-phenylene), 7.67–7.47 (m, 6H, H3, H4, H5-benzoyl).13C NMR (101 MHz, DMSO) δppm 166.41, 166.37, 165.82, 142.89, 135.16, 133.09, 132.32, 128.99, 128.93, 128.75, 128.26, 127.94, 127.81, 120.02 LC-MS (ESI) m/z 358 (M-H). Anal.Calcd for C21H17N3O3: C, 70.18; H, 4.77; N, 11.69. Found: C, 70.14; H, 4.79; N, 11.65.
3-chloro-N-(4-(2-(3-chlorobenzoyl) hydrazine-1-carbonyl) phenyl) benzamide (10b)
Yield: 69%, m.p: 273-275 °C, IR (KBr) ν (cm-1) 3300-3100 (NH), 1750-1650 (C = O), 1200-1400 (Ar). 1H NMR(400 MHz, DMSO) δppm 10.63 (s, 2H, 2NH), 10.53 (s, 1H, NH), 8.04 (d, J = 1.9 Hz, 1H, H2-benzoyl), 7.99–7.87 (m, 7H, -benzoyl, -phenylene), 7.70 (dd, J = 8.2, 2.0 Hz, 2H, H2, H6-phenylene), 7.59 (t, J = 7.9, Hz, 2H, -benzoyl).13C NMR (101 MHz, DMSO) δppm 165.71, 164.99, 164.91, 142.42, 137.09, 134.99, 133.85, 133.73, 132.24, 132.13, 131.11, 130.96, 128.79, 128.00, 127.91, 127.73, 127.10, 126.67, 120.13 LC-MS (ESI) m/z 426 (M-H). Anal.Calcd for C21H15Cl2N3O3: C, 58.90; H, 3.53; N, 9.81. Found: C, 58.84; H, 3.55; N, 9.85.
4-chloro-N-(4-(2-(4-chlorobenzoyl) hydrazine-1-carbonyl) phenyl) benzamide (10c)
Yield: 70%, m.p: 315-318 °C, IR (KBr) ν (cm-1) 3300-3100 (NH), 1750-1650 (C = O), 1200-1400 (Ar). 1H NMR (400 MHz, DMSO) δppm 10.60 (d, J = 4.4 Hz, 2H, 2NH), 10.49 (s, 1H, NH), 8.02 (d, J = 8.4 Hz, 2H, H3, H5-phenylene), 7.96 (t, J = 5.9 Hz, 6H, H3, H5-phenylene, H2, H6-benzoyl), 7.63 (t, J = 8.0 Hz, 4H, H3, H5-benzoyl) 13C NMR (101 MHz, DMSO) δppm 165.78, 165.37, 165.27, 142.72, 137.21, 137.17, 133.81, 131.79, 130.24, 129.86, 129.15, 129.01, 128.78, 127.87, 120.10 LC-MS (ESI) m/z 426 (M-H). Anal.Calcd for C21H15Cl2N3O3: C, 58.90; H, 3.53; N, 9.81. Found: C, 58.96; H, 3.50; N, 9.78.
4-methoxy-N-(4-(2-(4-methoxybenzoyl) hydrazine-1-carbonyl) phenyl) benzamide (10d)
Yield: 75%, m.p: 264-266 °C, IR (KBr) ν (cm-1) 3300-3100 (NH), 1700-1650 (C = O), 1200-1400 (Ar). 1H NMR(400 MHz, DMSO) δppm 10.36 (s, 3H, 3NH), 7.99 (d, J = 8.8 Hz, 2H, H2, H6-benzoyl), 7.92 (d, J = 5.5 Hz, 6H, H2, H3, H5, H6-phenylene, H2, H6-benzoyl), 7.07 (m, 4H, H3, H5-benzoyl), 3.85 (s, 3H, OMe), 3.84 (s, 3H, OMe) 13C NMR (101 MHz, DMSO) δppm 165.89, 165.69, 162.58, 162.47, 143.04, 130.24, 128.68, 127.62, 127.10, 125.22, 119.93, 114.19, 114.15, 55.94, 55.87 LC-MS (ESI) m/z 418 (M-H). Anal.Calcd for C23H21N3O5: C, 65.86; H, 5.05; N, 10.02. Found: C, 65.94; H, 5.02; N, 10.00.
4-fluoro-N-(4-(2-(4-fluorobenzoyl) hydrazine-1-carbonyl) phenyl) benzamide(10e)
Yield: 63%, m.p: 322-325 °C, IR (KBr) ν (cm-1) 3700-3100 (NH), 1700-1650 (C = O), 1200-1400 (Ar). 1H NMR (400 MHz, DMSO) δppm 10.55 (s, 2H, 2NH), 10.51–10.46 (m, 1H, NH), 8.05 (dd, J = 8.4, 5.4 Hz, 4H, H2, H6-benzoyl), 7.98–7.89 (m, 4H, H2, H3, H5, H6-phenylene), 7.39 (d, J = 8.7 Hz, 4H, H3, H5-benzoyl) 13C NMR (101 MHz, DMSO) δppm 165.93, 165.81, 165.32, 165.26, 163.45, 142.80, 131.55, 131.09, 131.00, 130.69, 130.60, 128.75, 127.81, 120.06, 116.13, 116.01, 115.92, 115.79 LC-MS (ESI) m/z 394 (M-H). Anal.Calcd for C21H15F2N3O3: C, 63.80; H, 3.82; N, 10.63. Found: C, 63.74; H, 3.86; N, 10.61.
4-nitro-N-(4-(2-(4-nitrobenzoyl) hydrazine-1-carbonyl) phenyl) benzamide (10f)
Yield: 71%, m.p: 287-289 °C, IR (KBr) ν (cm-1) 3300-3100 (NH), 1700-1650 (C = O), 1350, 1550 (NO), 1200-1400 (Ar) 1H NMR (400 MHz, DMSO) δppm 10.86 (s, 1H, NH), 10.72 (s, 2H, 2NH), 8.40 (m, 4H, H3, H5-benzoyl), 8.26–8.15 (m, 4H, H2, H6-benzoyl), 8.02–7.85 (m, 4H, H2, H3, H5, H6-phenylene) 13C NMR (101 MHz, DMSO) δppm 165.53, 164.76, 149.83, 149.75, 142.45, 140.77, 138.85, 129.83, 129.44, 128.84, 128.17, 124.25, 124.08, 120.25 LC-MS (ESI) m/z 448 (M-H). Anal.Calcd for C21H15N5O7: C, 56.13; H, 3.36; N, 15.58. Found: C, 56.09; H, 3.39; N, 15.55.
General procedure for the synthesis of the compounds 11-12
Para-aminobenzohydrazide 6 (0.151 g, 1 mmol) with the desired anhydrides (2.02 mmol) was stirred in warm ethyl acetate (50 °C) for 30 min. Then, stirring was continued for 24 h at room temperature. The reaction mixture was poured into 30 mL of distilled water, stirred for 30min. and acidified with concentrated HCl. The final product was recrystallized from EtOAc.
4-(2-(4-(3-carboxypropanamido) benzoyl) hydrazineyl)-4-oxobutanoic acid (11)
Yield: 55%, m.p: 185-187 °C, 194 dc, IR (KBr) ν (cm-1) 3200-2800 (NH, COOH), 2750-2600 (-CH2-CH2), 1700 (C = O), 1200-1400 (Ar). 1H NMR(400 MHz, DMSO) δppm 11.66 (br s, 2H, 2 COOH), 10.32-10.23 (d, 3H, 3NH), 7.80 (d, J = 8.5 Hz, 2H, H2, H6-phenylene), 7.67 (d, J = 8.5 Hz, 2H, H3, H5-phenylene), 2.60 (d, J = 6.3 Hz, 2H,-CH2-), 2.55 (d, J = 6.1 Hz, 2H, -CH2-), 1.99-1.94 (d, 4H,-CH2-) 13C NMR (101 MHz, DMSO) δppm 174.30, 171.00, 163.11, 160.17, 142.45, 129.03, 128.56, 118.45, 31.56, 29.12, 25.56, 18.45 LC-MS (ESI) m/z 350 (M-H). Anal.Calcd for C15H17N3O7: C, 51.28; H, 4.88; N, 11.96. Found: C, 51.20; H, 4.91; N, 12.04.
2-(2-(4-(2-carboxybenzamido) benzoyl) hydrazine-1-carbonyl) benzoic acid (12)
Yield: 85%, m.p: 186 °C, 197 dc, IR (KBr) ν (cm-1) 3300-2600 (NH, COOH), 1700 (C = O), 1200-1400 (Ar). 1H NMR(400 MHz, DMSO) δppm 13.04 (br s, 2H, 2 COOH), 10.60 (s, 1H, NH), 10.325 (s, 2H, 2NH), 7.90 (d, J = 7.6 Hz, 2H, H, H’ ortho-phthalic), 7.85–7.70 (m, 5H, phthalic, H2, H6-phenylene), 7.69–7.54 (m, 5H, phthalic, H3, H5-phenylene) 13C NMR (101 MHz, DMSO) δppm 168.19, 167.83, 163.12, 160.32, 142.72, 139.14, 132.30, 130.29, 130.08, 130.02, 128.94, 128.26, 119.04 LC-MS (ESI) m/z 446 (M-H). Anal.Calcd for C23H17N3O7: C, 61.75; H, 3.83; N, 9.39. Found: C, 61.70; H, 3.85; N, 9.42.
N-(4-(2-(phenylsulfonyl) hydrazine-1-carbonyl) phenyl) benzenesulfonamide (13) Compound 13 was obtained following the procedure described for the synthesis of 10a-10f.
Yield: 51%, m.p: 239-241 °C, IR (KBr) ν (cm-1) 3700-3300 (NH), 1700-1650 (C = O), 1200-1400 (Ar), 1100-1200 (SO2) 1H NMR (400 MHz, DMSO) δppm 11.40 (s, 1H, NH), 10.88 (s, 2H, 2NH), 7.97–7.50 (m, 14H, H2, H3, H5, H6-phenylene, benzenesulfonyl) 13C NMR (101 MHz, DMSO) δppm 166.03, 142.33, 139.68, 138.63, 135.10, 133.76, 129.94, 129.67, 129.24, 128.97, 128.05, 127.14, 126.29, 118.65 LC-MS (ESI) m/z 430 (M-H). Anal.Calcd for C19H17N3O5S2: C, 52.89; H, 3.97; N, 9.74. Found: C, 52.80; H, 3.94; N, 9.78.
In-vitro biological activity
The inhibitory activity of the final products was evaluated against fatty acid amide hydrolase with Cayman plate-based fluorometric FAAH assay kit (item number 10005196) using an excitation wavelength of 340 nm and an emission wavelength of 450 nm. The enzyme was incubated with inhibitors for 5 min in 0.125 mM Tris/HCl buffer (pH 9.0) at 37 °C. AMC-arachidonoyl amide and JZL-195 were used as substrate and positive control respectively. All test samples were dissolved in DMSO.