Plant material
The seeds of S. securidaca, petals of R. damascena and top flowered of T. disciforme were collected in September, May and July 2011 around the Fars, Gilan and Tehran Provinces of Iran, respectively. The plants were dried in shade and powdered. A voucher specimen of each plant is deposited at Herbarium of Faculty of Pharmacy, Tehran University of Medical Sciences.
Preparation of extracts
The powder of dried seeds of S. securidaca, petals of R. damascena and top flowered of T. disciforme (400 g of each sample) were macerated separately with 80% methanol at room temperature in a percolator, then solvents concentrated in vacuum to give gummy residue (crude extract). The crude extract of S. securidaca was re-extracted with petroleum ether, chloroform and methanol to achieve different fractions. The concentrated extracts and fractions were kept at 4 ºC prior to antimicrobial tests.
Microorganisms and media
The various organisms were used as standard strains in this study, include Staphylococcus aureus ATCC6538, Staphylococcus epidermidis ATCC12229, Bacillus subtilis ATCC6633 and Bacillus cereus ATCC1274 as Gram positive bacteria; Pseudomonas aeruginosa ATCC9027, Escherichia coli ATCC8739 and Klebsiella pneumoniae ATCC1003 as Gram negative bacteria; Candida albicans ATCC1023 and Aspergillus niger ATCC16404 as fungi, which were obtained from Department of Drug and Food Control, Faculty of Pharmacy, Tehran University of Medical Sciences. Soybean Casein Digest Agar (Merck, Germany) and Saburouad Dextrose Agar (Merck, Germany) were used as medium for the growth of bacterial and fungal strains, respectively.
Antimicrobial assay
The antibacterial and antifungal activity of the different extracts and fractions of the plants were studied by cup plate diffusion method as described by Warnock DW (
13). Each organism was separately suspended in normal saline solution which was equal to 10
8 CFU/mL. For preparing base plates, 25 mL of cooled media was poured in to the sterile Petri dishes and inoculated with one of the microorganisms by spreading microbial suspension over the plate with a sterile cotton swab. Then in each plate, holes of 7 mm in diameter were made at equal distances using sterile cork borer. Different concentrations of fractions (100, 50, 25, 12.5, 6.25, 3.125 and 1.562 mg/mL) were prepared and DMSO (dimethyl sulfoxide) with 1% w/v concentration was used as a solvent. 100 µL of each extracts and fractions were added to each hole on the medium. The plates containing bacteria and fungi were incubated at 35 ºC for 24 h and 25 ºC for 48 h, respectively. The diameter of zone of inhibition was measured in millimeters after incubation as an indication of activity and compared with the solvent as negative control. Gentamycin and Nystatin were used as positive control. All the tests were repeated in triplicate.
Elucidation of compounds of T. disciforme
Since there was few reports about phytochemical investigation of T. disciforme extract, it was selected for isolation and purification of compounds. Crude extract (313.61 g) from 1.5 Kg of T. disciforme was fractionated with petrol ether (PE) and chloroform (CH) yield 50.11 and 13.5 g respectively. Remaining gummy residue which was soluble in methanol called methanol fraction (ME; 250 g).
ME fraction (5 g) was applied to reverse phase silicagel column chromatography (2.5×13.5 cm) and eluted with gradient mobile phase H2O-MeOH (80:20 → 0: 100, V/V) to afford 5 subfractions. M3 subfraction (564 mg) was selected for size exclusion chromatography (SEC) on Sephadex LH-20 column (2.1×67 cm) eluted with MeOH. Compounds 1 (5.5 mg), 2 (4.3 mg) and 3 (12 mg) were isolated and purified. M4 subfraction (435 mg) subjected to SEC on Sephadex LH-20 column (2.1×67 cm) and MeOH: EtOAC (2:1) was used as solvent to obtain compound 4 (6.5 mg), 5 (3.8 mg) and 6 (9.5 mg). For further purification all compounds were applied to a Sephadex-LH20 CC (1.2×55 cm) eluted with methanol separately.
Spectral data of isolated compounds
Luteolin 1: UV λ max nm MeOH: 345.5, 308, 284, 260sh; + AlCl3: 422, 307sh, 286; + AlCl3/HCl: 384, 350, 318sh, 307, 286; + NaOAC : 390, 307, 289 ; + NaOAC/H3BO3 : 430sh, 367, 370, 289; 1H NMR (400MHz, DMSO-d6): δ 7.46 (1H, dd, J=8.4, 2.0 Hz, H-6'), 7.00 (1H, d, J=8.4 Hz, H-5'), 7.52 (1H, d, J=2.0 Hz, H-2'), 6.57 (1H, s, H-3), 6.54 (1H, d, J=2 Hz, H-8), 6.25 (1H, d, J=2 Hz, H-6): 13C NMR(DMSO-d6): δ 182.9 (C-4), 165.2 (C-7), 165.4 (C-2), 162.3 (C-5), 158.5 (C-9), 150.1 (C-4'), 146.1 (C-3′), 122.8 (C-6′), 121.4 (C-1′), 115.9 (C-5'), 113.2 (C-2'), 102.9 (C-3), 102.9 (C-10), 99.2 (C-6), 94.1 (C-8).
Quercetin-7-O-glucoside 2: UV λ max nm MeOH: 369, 270sh, 250; + AlCl3: 441, 340sh, 270; + AlCl3/HCl: 430, 368sh, 292sh, 266; + NaOMe: 423, 270, 267sh, 246; + NaOAC : 256, 386 ; + NaOAC/H3BO3 : 254, 420; EIMS: m/z %: 302[M-glucose]+(100), 285 [M-OH]+(12), 273 [M-COH]+(8), 193 [M-B]+(12), 153[A1+H]+(27), 137[B2]+(32), 105[B1-COH]+(34); 1H NMR (400MHz, DMSO-d6): δ 7.56 (1H, dd, J=8.4, 2.4 Hz, H-6'), 7.74 (1H, d, J=2.4 Hz, H-2'), 6.91 (1H, d, J=8.4 Hz, H-5'), 6.77 (1H, d, J=2 Hz, H-8), 6.42 (1H, d, J=2 Hz, H-6), 5.08 (1H, d, J=7.6 Hz, H-1''), 3.5- 4.5 (5H, m, H-2''-6''); 13C NMR(DMSO-d6): δ 174.9 (C-4), 161.6 (C-7), 159.3 (C-5), 157.2 (C-9), 146.9 (C-4'), 146.5 (C-2), 144.0 (C-3'), 141.5 (C-3), 135.0 (C-1′), 120.7 (C-6′), 118.4 (C-2′), 114.5 (C-5'), 103.9 (C-10), 100.0 (C-1''), 98.8 (C-6), 98.0 (C-8), 76.1 (C-5''), 75.4 (C-3''), 72.1 (C-2''), 68.5 (C-4''), 59.6 (C-6'').
Kaempferol-7-O-glucoside 3: UV λ max nm MeOH: 367, 298sh, 267, 255; + AlCl3: 425, 345, 293sh, 266; + AlCl3/HCl: 425, 345, 293sh, 265; + NaOMe: dec; + NaOAC : 325sh, 380, 325sh, 266 ; + NaOAC/H3BO3 : 364, 256; 1H NMR (400MHz, DMSO-d6): δ 7.93 (2H, d, J=8.0 Hz, H-2',6'), 6.88 (2H, d, J=8.0 Hz, H-3',5'), 6.46 (1H, d, J=2.0 Hz, H-8), 6.20 (1H, d, J=2.0 Hz, H-6).
Kaempferol 4: UV λ max nm MeOH: 365, 320sh, 295sh, 266, 255; + AlCl3: 425, 330sh, 300sh, 272; + AlCl3/HCl: 425, 330sh, 300sh, 272;+ NaOMe: dec; + NaOAC : 390, 302, 268 ; + NaOAC/H3BO3 : 370, 320sh, 295sh, 265; 1H NMR (400MHz, DMSO-d6): δ 8.15 (2H, d, J=8.9 Hz, H-2',6'), 6.99 (2H, d, J=8.9 Hz, H-3',5'), 6.46 (1H, d, J=1.9 Hz, H-8), 6.27 (1H, d, J=1.9 Hz, H-6); 13C-NMR(DMSO-d6): δ 176.19 (C-4), 163.8 (C-7), 160.7 (C-5), 160.44 (C-4'), 156.75 (C-9), `149.0 (C-2), 136.19 (C-3), 129.52 (C-2′, 6′), 131.72 (C-1′), 115.45 (C-3', 5′), 102.56 (C-10), 98.05 (C-6), 93.5 (C-8).
Apigenin 5: UV λ max nm MeOH: 336, 284, 267.5; + AlCl3: 388, 345sh, 301, 276, 219; + AlCl3/HCl: 387, 343, 300, 276, 217; + NaOMe: 394, 318, 274, 214; + NaOAC : 359, 305, 272; + NaOAC/H3BO3 : 336, 268; EIMS: m/z %: 270[M-glucose]+(100), 152[A1](25), 121[B2](36), 118[B1](25); 1H NMR (400MHz, DMSO-d6): δ 7.76 (2H, d, J=8.4 Hz, H-2',6'), 6.95 (2H, d, J=8.4 Hz, H-3',5'), 6.51 (1H, s, H-3), 6.48 (1H, s, H-8), 6.24 (1H, s, H-6).
Apigenin-7-O-glucoside 6: UV λ max nm MeOH: 332, 268; + AlCl3: 385, 347, 299, 276; + AlCl3/HCl: 382, 341, 299, 277; + NaOMe: 386, 300, 279, 265; + NaOAC : 397sh, 341, 267; + NaOAC/H3BO3 : 336, 266, 256sh; EIMS: m/z %: 270[M-glucose]+(100), 152[A1](18), 120[B2-H](25), 117[B1-H](18); 1H NMR (400MHz, DMSO-d6): δ 7.84 (2H, d, J=8.0 Hz, H-2',6'), 6.94 (2H, d, J=8.0 Hz, H-3',5'), 6.72 (1H, s, H-3), 6.66 (1H, s, H-8), 6.44 (1H, s, H-3), 5.00 (1H, d, J=7.2 Hz, H-1''), 3.4- 4.5 (5H, m, H-2''-6'').