Chronic HBV infection is not only a virological disorder but also a complex inflammatory and oxidative stress-driven disease that progressively damages the liver. While nucleos(t)ide analogues (NA) effectively suppress HBV replication, they do not eliminate covalently closed circular DNA (cccDNA) or reverse HBV-induced hepatic inflammation and oxidative injury, which are central to disease progression and hepatocarcinogenesis (
17,
18). In parallel, population-level data continue to show that HBV/HCV remain substantial public-health burdens in high-risk settings, reinforcing the need for adjunct strategies that address both virological and host-injury components (
19). In this context, multifunctional agents capable of simultaneously inhibiting viral replication and alleviating liver injury are of significant therapeutic value. Our study provides compelling evidence that wedelolactone, a natural coumestan derived from Eclipta prostrata, exhibits dual antiviral and hepatoprotective activity in HBV-infected hepatocytes. Wedelolactone treatment resulted in a concentration-dependent inhibition of HBV transcription, as demonstrated by suppression of Enh2/Core, Enh1/X, PreS1, and PreS2 promoter activities. This is a notable finding, as few natural compounds have been shown to directly modulate HBV promoter-driven transcription. This upstream regulatory effect translated into downstream suppression of pregenomic RNA (pgRNA), S RNA, and viral DNA synthesis, as well as reduced expression of HBcAg and HBsAg. These results suggest that wedelolactone exerts antiviral effects at both transcriptional and post-transcriptional levels, likely targeting host factors or transcriptional regulators exploited by HBV. Conceptually, diverse viruses across biological systems rely on host regulatory networks for transcription/translation and spread, and viral proteins can act as “rate-limiting” determinants of host range and tissue permissiveness (
20,
21). Mechanistically, the broad, dose-dependent reduction across multiple HBV promoters suggests that wedelolactone may act upstream at the level of host transcriptional regulation rather than targeting a single promoter-specific element. HBV enhancer/promoter activity is strongly governed by hepatocyte-enriched transcription factors and nuclear receptors, including HNF4α and PPARα/RXRα complexes, which coordinate transcription from EnhII/Core and other regulatory regions (
22,
23). Given wedelolactone’s reported ability to modulate inflammatory signaling (e.g., the NF-κB axis) and cellular stress responses, one plausible hypothesis is that it indirectly reduces the availability, DNA-binding competence, or co-activator recruitment of these hepatocyte transcriptional regulators, thereby diminishing HBV promoter-driven transcription. A second plausible hypothesis is epigenetic repression of viral transcriptional templates through altered co-regulator balance (e.g., reduced histone acetylation and/or increased recruitment of repressive chromatin modifiers), which could translate into decreased promoter output across multiple regulatory regions (
24). These possibilities remain hypotheses in the absence of direct transcription factor occupancy or chromatin-state measurements; future studies will test them using ChIP-qPCR for HNF4α/PPARα binding and for activating/repressive histone marks on HBV templates, along with assessment of relevant co-activators/co-repressors and nuclear receptor signaling. Notably, virus–host regulation is frequently multi-layered and can involve coordinated control of transcriptional competence, RNA stability, and host defensive silencing — phenomena well documented in viral systems where coat proteins and movement proteins modulate permissiveness and infection outcomes (
20,
21). In alignment with previous studies, wedelolactone also exhibited significant anti-inflammatory activity. HBV infection is known to induce persistent activation of NF-κB signaling, which contributes to chronic liver inflammation (
25). Our data demonstrate that wedelolactone attenuates NF-κB p65 expression and restores IκBα levels, accompanied by a significant reduction in proinflammatory cytokines such as TNF-α and IL-6. These effects are consistent with earlier findings that wedelolactone inhibits IKK activity and prevents NF-κB nuclear translocation (
25). Since inflammatory amplification is also a determinant of disease severity and biomarker patterns across viral infections, mechanistic alignment between antiviral control and reduced inflammatory injury is therapeutically meaningful (
26). Additionally, wedelolactone increased Nrf2/HO-1/NQO1 expression and reduced Keap1 levels, which is consistent with engagement of the cellular antioxidant response (
27). However, because intracellular ROS levels, Keap1–Nrf2 binding, and Nrf2 nuclear accumulation were not directly assessed in this study, the upstream mechanism(s) responsible for Nrf2 activation remain hypotheses. Future work will test whether wedelolactone (i) reduces oxidative burden and/or (ii) impairs Keap1-mediated sequestration of Nrf2 by performing ROS quantification assays (e.g., DCFDA), Nrf2 nuclear localization analyses (immunofluorescence and/or nuclear–cytoplasmic fractionation), and Keap1–Nrf2 interaction studies (co-immunoprecipitation). Importantly, wedelolactone was found to be non-cytotoxic at concentrations up to 10 µM and did not induce apoptosis in HBV-infected cells, as evidenced by preserved cell viability and lack of cleaved caspase-3 and PARP expression. This favorable safety profile, combined with its potent antiviral and immunomodulatory effects, positions wedelolactone as a promising candidate for further development (
12). Beyond natural products, computational and structure-guided antiviral work against RNA viruses (including SARS-CoV-2) further supports the broader feasibility of host/virus-targeted multi-pronged strategies, although such approaches require careful validation in wet-lab systems (
28). To our knowledge, this is the first study to comprehensively evaluate the impact of wedelolactone on HBV promoter activity, transcriptional output, DNA replication, viral antigen expression, and host response pathways within a single experimental framework. Importantly, when positioned against other extensively studied anti-HBV natural products, wedelolactone appears to occupy a distinct “dual-pathway” niche. Curcumin has been reported to suppress HBV, including effects linked to chromatin-level regulation such as reduced histone acetylation on cccDNA-associated templates, but its translational development is frequently constrained by formulation/bioavailability limitations and variability across experimental systems (
29). Epigallocatechin gallate (EGCG) has shown anti-HBV activity in multiple reports and is often discussed in the context of pleiotropic host-targeted effects; however, published mechanisms are heterogeneous (and in some models more entry- or host-stress–biased rather than directly tied to multi-promoter transcriptional repression), which can complicate positioning as a defined transcriptional inhibitor (
30,
31). Baicalin and related flavonoids are also repeatedly reported to dampen HBV markers and host inflammation, yet the mechanistic emphasis across studies often centers on broad immunomodulatory signaling rather than a clear, experimentally demonstrated upstream effect on multiple HBV promoter/enhancer elements (
32). In contrast, the distinguishing feature in our dataset is the concentration-dependent suppression across several key HBV promoters (Enh2/Core, Enh1/X, PreS1, PreS2) accompanied by parallel attenuation of NF-κB–driven inflammatory outputs and activation of antioxidant-response markers, providing a coherent rationale for combined antiviral and hepatoprotective potential within a single experimental framework. It should be noted that the present study employs a 1.3-mer HBV transfection platform to interrogate HBV transcription/replication and host-response modulation under controlled conditions; therefore, our conclusions are confined to plasmid-driven HBV replication readouts and do not directly address viral entry or cccDNA establishment/maintenance. Validation in physiologically relevant infection systems (e.g., HepG2-NTCP, HepaRG, or primary human hepatocytes) will be an important next step to extend these findings across the complete HBV lifecycle. Complementary work in virology also highlights how assay design, primer selection, and detection strategies can influence interpretation and reproducibility, underscoring the need for robust validation across platforms (
33,
34). Moreover, translational relevance is strengthened when mechanistic findings are evaluated alongside surveillance/epidemiologic signals in real-world viral disease contexts (
35,
36). In conclusion, our findings suggest that wedelolactone offers a dual mode of action—direct inhibition of HBV transcription and replication, along with attenuation of HBV-induced inflammation and oxidative damage. These properties justify its further investigation as an adjunct or standalone candidate in chronic HBV therapy. Future studies should focus on validating these findings in vivo and exploring wedelolactone's effect on cccDNA transcription and host epigenetic regulation. Parallel advances in viral immuno-informatics and molecular vaccine design further emphasize the expanding toolkit available for virus-focused intervention development (
37).