Metabolic flexibility aids
C. albicans in establishing infections (
19,
24,
25). We examined the possible roles of ICL1, a major glyoxylate-synthesizing enzyme, in the distinctive traits of biofilms. Biofilm formation by ICL1/
icl1 and
icl1//
icl1 showed a partial impact of ICL, as metabolic activity remained high. The continual growth of ICL1 mutants on non-fatty-acid compounds showed that glyoxylate is not the sole pathway capable of synthesizing C
4 molecules for gluconeogenesis, suggesting the presence of similar derivatives and other catabolic pathways. The glyoxylate cycle is preferred because it consumes less energy; however, it can be bypassed in the presence of glucose, farnesol, lactate, malic acid, and succinic acid. Moreover, glucose and fatty acids are more energetically favorable and thus their presence represses lactate assimilation (
19,
26).
Lactate, malic acid, and succinic acid derived from pyruvate can be oxidized to oxaloacetate through the pyruvate dehydrogenase pathway. This supports the observation that ICL1/
icl1 and
icl1/
icl1 are able to form extensive biofilms in lactate-containing media. The low assimilation observed in ICL1/
icl1 (
Figure 2B), later compensated by a rapid growth at the intermediate phase until the matured stage, could be due to incomplete dependence on the pyruvate decarboxylase pathway because of ICL1 allele partial expression; the glyoxylate pathway is preferred to other alternative pathways until the depletion of the precursor. The significant growth of biofilms on RPMI 1640 medium suggests that ICL does not affect their formation. A possible rationale is that growth on lactate may enhance
C. albicans survival and metabolic activity, influencing biofilm growth through combinatorial synthesis of limited carbon. This supports that multiple assimilation mechanisms are used simultaneously to maintain their signature resistance (
27). Metabolic robustness supports growth, thereby promoting resistance, which increases with maturation and metabolic activity.
The resistance phenotype expressed at each formation stage increased with maturation. The evidence showcased the insignificant role of ICL in the resistance of sessile cells, although it may be partially involved in the early-phase metabolic shift, as shown in
Figure 3. However, there was no significant association between isocitrate lyase and clinical resistance, signifying that ICL is not a sole determinant of this characteristic. The
C. albicans biofilm resistance phenotype signature and virulence potential for initiating infections was not impaired; in fact, it was enhanced by the high metabolic action that increased with time. Absence of ICL may activate and deactivate other genes that function in resistance acquisition, as observed in
zap1/
zap1 mutants (
28). For that reason, a conclusion was reached that ICL deletion may upregulate other resistance mechanisms that compensate for its unavailability. Developmental images define the complexity of biofilms and identify three distinct growth phases. Filamentous growth is a prominent feature of biofilms, and hyphae growth incapacitation in the absence of ICL to a substantial extent suggests that there is lower proliferation in tissues and less establishment of infections through the dissemination of yeast cells. Furthermore, attenuation of filamentous growth confirms ICL as a promoter of hyphae morphogenesis (
24,
26,
29,
30).
The roles of modifying proteins Bgl2, Phr1, and Xog1 have been recently reported to mediate glucan delivery to the matrix through a controlled channel from the cell wall, along with depletion signaling. Our results showed the activity of the glucan synthase pathway and of β-1, 3-glucan in the ECM, depicting the activity of delivery mechanisms (
30). Lower accumulation at the early phase may be due to high energy consumption by the survival and replication processes. At the mature phases, the significant amplification may perhaps be attributed to energy conservation and upregulation of mechanisms that mediate survival. It could also be a reflection of stable β-1, 3-glucan due to lower sequestration activity as a result of other stage-specific mechanisms of resistance. Gene expression profiling revealed a substantial effect of ICL on the mRNA of the resistance genes, suggesting that resistivity tends toward genotypic variation.
Glucan synthase-encasing gene expression explains the continual synthesis of β-1, 3-glucan as observed in the constructed mutants. Previous works have shown that
ERG11 transcripts are higher in young biofilms, which was supported by the findings of this study (
31,
32). Upregulation of
ERG11 at the early and intermediate stages suggests that its role is streamlined to certain stages, and its expression indicates a response to fluconazole treatment through sterol accumulation and mutation. High
ERG11 expression in ICL1/
icl1 suggests that ICL is needed for
ERG11 functionality. However, resistance was maintained, suggestive of influences by other mechanisms. The role of efflux-pump genes has been addressed (
31,
33,
34). These genes are responsible for the expulsion of drugs from cells. The results of the present study revealed the function of
CDR2 to be early-phase-specific. Nevertheless, resistance was exhibited at all stages, suggestive of other genetic influences that are yet to be identified. Thus, ICL may be a part of the synergistic interactions and mechanisms that mediate biofilm resistance phenotypes.
Biofilm formation by C. albicans ICL heterozygous and homozygous mutants was found to not be regulated by ICL, as metabolic activity remained high, suggesting that ICL is a negative regulator for other synthesizing enzymes and pathways, thereby advancing the cell’s growth and homeostasis. The resistance phenotype was expressed at each formation stage, increasing with maturation. True hyphae morphogenesis impairment indicates filamentous growth as a prominent feature of biofilms, regulated by the preferred non-fermentable carbohydrate-absorption pathway.