To a mixture of metronidazole 1 (0.5 g, 2.92 mmol), triphenylphosphine (1.125 g, 4.28 mmol), and hydroxyphthalimide (0.7 g, 4.28 mmol) in 26 mL of dry THF, DIAD (diisopropyl azodicarboxylate) (1.9 mL, 9.75 mmol) was added in one portion at room temperature. The reaction mixture was stirred for 24 h. The solvent was removed under low pressure. The residue was triturated with diethyl ether and filtered to obtain a white solid with the following characteristics:
A mixture of metronidazole 1 (0.5 g, 2.92 mmol), triphenylphosphine (1.14 g, 4.34 mmol), and succinimide (0.43 g, 4.34 mmol) in 25 mL dry THF was cooled to 0 - 5ºC. Then, a solution of DIAD (diisopropyl azodicarboxylate) (1.9 mL, 9.75 mmol) in 3 mL dry THF was added dropwise for 20 min. The reaction mixture was stirred for 24 h. The progress of the reaction was monitored by TLC. The solvent was removed to give oil under low pressure. The oil was solidified using diethyl ether and then crystallized from 2-propanol. The following characteristics appeared:
A solution of metronidazole 1 (10 g, 58.47 mmol) in dry pyridine was cooled in an ice bath; then, benzene sulfonyl chloride (8.1 mL, 63.8 mmol) was added dropwise. The reaction mixture was stirred for 24 h at room temperature. The achieved solution was diluted with ice/water, and the obtained product was washed several times with water, with the following characteristics:
2.2.1. General Synthesis Method for Compounds (4a-f)
Five milliliters of triethylamine was added to a solution of 3 (0.5 g) in dry THF (20 mL), and the mixture was cooled to 0 - 5ºC. Then, appropriate benzoyl chloride (2.85 mmol) was added dropwise. The mixture was stirred for 5 h. The solvent was removed under low pressure. The residue was dissolved in dichloromethane (30 mL) and extracted with acidified water by 3 M HCl (5 × 20 mL). The combined aqueous layers were made alkaline (pH 7.5 - 8) with NaOH solution and extracted with dichloromethane (5 × 20 mL). The combined organic layers were washed with a sodium chloride saturated solution (2 × 25 mL) and then dried with Na2SO4. The organic solvent was evaporated under a vacuum. The residue was crystallized from ethanol.
N-(2-(2-Methyl-5-nitro-1H-imidazol-1-yl)ethyl) benzamide (4a) (24) It had the following characteristics: Yield: 30%; mp: 128.7 - 131.2ºC; IR (KBr, cm-1): 3364 (NH), 1637 (C=O), 1544 (NO2), 1366 (NO2); 1H NMR (500 MHz, CDCl3): δ: 2.52 (3H, s, CH3), 3.83 (2H, m, CH2-NH), 4.63 (2H, t, J = 6.2 Hz, Imidazole-CH2), 6.76 (1H, t, NH), 7.46 (2H, t, J = 7.63 Hz, ArH), 7.55 (1H, t, J = 7.4 Hz, ArH), 7.75 (2H, d, J = 7.3 Hz, ArH), 7.97 (1H, s, Imidazole-H); ESI-MS (m/z): [M+Na]+ 297; Anal. Calc. for C13H14N4O3 (274.11): C 56.93, H 5.14, N 20.43; found: C 56.92, H 5.15, N 20.42.
4-Fluoro-N-(2-(2-methyl-5-nitro-1H-imidazol-1-yl) ethyl)benzamide (4b):
It had the following characteristics: Yield: 35%; mp: 202 - 204ºC; IR (KBr, cm-1); 3386 (NH), 1648 (C=O), 1556 (NO2), 1375 (NO2); 1H NMR (500 MHz, CDCl3): δ: 2.27 (3H, s, CH3), 3.54 (2H, m, CH2-NH), 4.37 (2H, t, J = 6.1 Hz, Imidazole-CH2), 6.89 (2H, t, J = 8.6 Hz, ArH), 7.65 (2H, d, J = 8.6 Hz, ArH), 7.78 (1H, s, Imidazole-H), 8.23 (1H, t, NH); ESI-MS (m/z): [M+Na]+ 315; Anal. Calc. for C13H13FN4O3 (292.10): C 53.42, H 4.48, N 19.17; found: C 53.44, H 4.48, N 19.18.
4-Chloro-N-(2-(2-methyl-5-nitro-1H-imidazol-1-yl) ethyl)benzamide (4c):
It had the following characteristics: Yield: 45%; mp: 197.2 - 199.2ºC; IR (KBr, cm-1): 3348 (NH), 1639 (C=O), 1543 (NO2), 1356 (NO2); 1H NMR (500 MHz, DMSO-d6): δ: 2.35 (3H, s, CH3), 3.63 (2H, m, CH2-NH), 4.44 (2H, t, J = 5.8 Hz, Imidazole-CH2), 7.53 (2H, d, J = 8.8 Hz, ArH), 7.74 (2H, d, J = 7.8 Hz, ArH), 8.02 (1H, s, Imidazole-H), 8.76 (1H, t, J = 5.82 Hz, NH); ESI-MS (m/z): [M+Na]+ 331.5; Anal. Calc. for C13H13ClN4O3 (308.07): C 50.58, H 4.24, N 18.15; found: C 50.57, H 4.24, N 18.16.
N-(2-(2-Methyl-5-nitro-1H-imidazol-1-yl)ethyl)-4- nitrobenzamide (4d):
It had the following characteristics: Yield: 32%; mp: 197.8 - 199.3ºC; IR (KBr, cm-1): 3425 (NH), 1666 (C=O), 1514 (NO2), 1361 (NO2); 1H NMR (500 MHz, DMSO-d6): δ: 2.36 (3H, s, CH3), 3.67 (2H, m, CH2-NH), 4.46 (2H, t, J = 5.7 Hz, Imidazole-CH2), 7.96 (2H, d, J = 8.7 Hz, ArH), 8.05 (1H, t, J = 8.7 Hz, NH), 8.31 (2H, d, J = 8.6 Hz, ArH), 9.02 (1H, s, Imidazole-H); ESI-MS (m/z): [M+H]+ 320, [M+Na]+ 342; Anal. Calc. for C13H13N5O5 (319.09): C 48.90, H 4.10, N 21.94; found: C 49.01, H 4.10, N 21.93.
4-Methyl-N-(2-(2-methyl-5-nitro-1H-imidazol-1-yl) ethyl)benzamide (4e):
It had the following characteristics: Yield: 37%; mp: 187 - 191ºC; IR (KBr, cm-1): 3368 (NH), 1637 (C=O), 1543 (NO2), 1353 (NO2); 1H NMR (500 MHz, DMSO-d6): δ: 2.33 (3H, s, phenyl-CH3), 2.50 (3H, s, Imidazole-CH3), 3.62 (2H, m, CH2-NH), 4.43 (2H, t, J = 5.9 Hz, Imidazole-CH2), 7.25 (2H, d, J = 8.0 Hz, ArH), 7.63 (2H, d, J = 8.1 Hz, ArH), 8.02 (1H, s, Imidazole-H), 8.58 (1H, t, J = 5.3 Hz, NH); ESI-MS (m/z): [M+H]+ 289; Anal. Calc. for C14H16N4O3 (288.12): C 58.32, H 5.59, N 19.43; found: C 58.37, H 5.59, N 19.42.
4-Methoxy-N-(2-(2-methyl-5-nitro-1H-imidazol-1-yl) ethyl)benzamide (4f):
It had the following characteristics: Yield: 25%; mp: 149.2 - 150.3ºC; IR (KBr, cm-1): 3368 (NH), 1642 (C=O), 1523 (NO2), 1370 (NO2); 1H NMR (500 MHz, CDCl3): δ: 2.52 (3H, s, CH3), 3.77 (2H, m, CH2-NH), 3.87 (3H, s, OCH3), 4.62 (2H, t, J = 6.2 Hz, Imidazole-CH2), 6.62 (1H, t, J = 8.8 Hz, NH), 6.95 (2H, d, J = 8.8 Hz, ArH), 7.73 (2H, d, J = 6.9 Hz, ArH), 7.97 (1H, s, Imidazole-H); ESI-MS (m/z): [M+Na]+ 327; Anal. Calc. for C14H16N4O4 (304.12): C 55.26, H 5.30, N 18.41; found: C 55.30, H 5.29, N 18.40.
1-(2-Azidoethyl)-2-methyl-5-nitro-1H-imidazole (5) (25): A mixture of 2d (1 g, 3.58 mmol), sodium azide (35.8 mmol), triethylamine in water (5 mL), and 18-crown-6-ether in xylene (30 mL) was refluxed for 48 h. The solvent was removed by distillation. The residue was diluted in water and extracted with ethyl acetate (4 × 20 mL). The combined organic layers were evaporated. The residue was triturated with n-hexan. The resulting solid was washed several times with n-hexane, which gave the following characteristics:
Yield: 54%; mp: 50 - 53ºC; IR (KBr, cm-1): 2123 (N3), 1540 (NO2), 1372 (NO2); 1H NMR (500 MHz, DMSO-d6): δ: 2.48 (3H, s, CH3), 3.79 (2H, t, J = 5.6 Hz, CH2-N3), 4.48 (2H, t, J = 5.6 Hz, Imidazole-CH2), 8.03 (1H, s, Imidazole-H); ESI-MS (m/z): [M+H]+ 197; Anal. Calc. for C6H8N6O2 (196.07): C 36.74, H 4.11, N 42.84; found: C 36.65, H 4.12, N 42.87.
1,4-Bis(2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl) piperazine (6):
A mixture of 2d (1 g, 3.58 mmol), piperazine (0.092 g, 1.06 mmol), and sodium bicarbonate (excess) in dioxane was refluxed for 24 h. The solvent was evaporated under low pressure. Water (10 mL) was added to the residue and extracted by chloroform (3 × 10 mL). The combined organic layers were washed with water, dried with Na2SO4, and purified using column chromatography (mobile phase first: chloroform, Second: chloroform 83.3%: methanol 16.6%), giving the following characteristics:
Yield: 25%; mp: 197 - 199ºC; 1H NMR (500 MHz, CDCl3): δ: 2.47 (8H, broad s, Piperazine), 2.53 (6H, s, CH3), 2.67 (4H, t, J = 5.9 Hz, CH2-N), 4.40 (4H, t, J = 5.9 Hz, CH2-Imidazole), 7.94 (2H, s, Imidazole-H); ESI-MS (m/z): [M+Na]+ 415; Anal. Calc. for C16H24N8O4 (392.19): C 48.97, H 6.16, N 28.56; found: C 48.94, H 6.17, N 28.53.
2-(2-Methyl-5-nitro-1H-imidazol-1-yl)acetaldehyde (7):
Oxalyl chloride (2.3 mL, 25.3 mmol) was added dropwise to 160 mL of dry dichloromethane under argon. After that, the reaction mixture was cooled to -50ºC in dry ice. Then, DMSO (17 mL, 240 mmol) was added dropwise. After 20 min, a solution of metronidazole 1 (3 g, 17.54 mmol) in 15 mL DMSO was added dropwise. By passing another 20 min, dry triethylamine (33 mL, 240 mmol) was added dropwise. The reaction was stirred for 10 minutes and then warmed to room temperature. The mixture was diluted in ethyl acetate and extracted with water (3 × 50 mL). The combined aqueous layers were extracted with ethyl acetate (3 × 250 mL). The combined organic layers were washed with saturated NaCl and dried with Na
2SO
4. The organic solvent was evaporated under a vacuum. The obtained residue was purified using column chromatography (mobile phase: Dichloromethane 97%: Methanol 3%) to obtain the product as an oil (
26) with the following characteristics:
Yield: 68%; ESI-MS (m/z): [M+H]+ 170.
2-(2-(2-Methyl-5-nitro-1H-imidazol-1-yl) ethylideneamino)isoindoline-1,3-dione (8):
A mixture of acidified (acetic acid pH = 4 - 4.5) N-aminophthalimide (0.35 g, 2.16 mmol) in dioxane was added dropwise to a solution of 7 (0.37 g, 2.16 mmol) in dioxane at 60ºC, and the reaction mixture was refluxed for 19 h at 60ºC. The solvent was evaporated, and the obtained liquid was triturated with diethyl ether and filtered to obtain a brown solid with the following characteristics:
Yield: 55.2%; mp: 206 - 208ºC, crystallized in diethyl ether; IR (KBr, cm-1): 1785 (C=O), 1734 (C=O), 1533 (NO2), 1358 (NO2); 1H NMR (500 MHz, CDCl3): δ: 2.59 (3H, s, CH3), 5.36 (2H, d, J = 4.0 Hz, CH2-Imidazole), 7.82 (2H, m, ArH), 7.93 (2H, m, ArH), 8.03 (1H, s, Imidazole-H), 9.04 (1H, t, J = 4.0 Hz, HC = N); Anal. Calc. for C14H11N5O4 (313.08): C 53.68, H 3.54, N 22.36; found: C 53.67, H 3.53, N 22.35.