Blastocystis is a zoonotic protozoan parasite living in the digestive system of some vertebrates (
1). For the first time in 1911, it was found as a fungal yeast in human stool specimen; then, it was identified as a nonpathogenic protozoan and was forgotten for decades (
2,
3). Between 1970 and 1980 with several studies conducted on
Blastocystis, the first spark of attraction was paid in relation to biology and clinical features of this parasite (
4). In recent decades, identification of this parasite has had a significant progress (
3). The results of epidemiological studies, in vitro studies, and research on laboratory animals has shown that this parasite is potentially pathogenic (
3).
Several factors such as parasite load, secreting enzymes such as cysteine protease, parasite subtypes, parasite proteins and even host conditions are involved in the pathogenesis of parasite (
5-
8).
Blastocystis has a worldwide distribution and is transmitted by cysts via contaminated food and water (
9,
10). Its prevalence in developing countries is more than in developed countries, which is a result of poor health (
11). Isolates of the parasite separated from human are called
Blastocystishominis and those from animals are generally called
Blastocystis sp. In addition, some classifications may be based on the relevant hosts (
12). To recognize the genotypes of
Blastocystis sp., a PCR was performed using seven pairs of sequence-tagged sites (STS) primers (
13).
Each subtype has a specific tendency to specific hosts. For example, human is the main host of ST3, pig and cattle are the main hosts of ST5, and rodents are the main hosts of ST4; but these hosts are not specific for
Blastocystis and the parasite has been reported in human too, which is the sign of zoonotic
Blastocystis (
3).
Blastocystis is mysterious and unique with several morphologies and sizes. Its microscopic diagnosis is difficult so that it is sometimes even ignored by experienced people. Various methods such as direct wet-mount, Lugol's iodine staining, formaldehyde-ether sedimentation, dedicated staining, culture and PCR have been used for its diagnosis; PCR is the most sensitive method with high specificity (
14,
15).