Materials
SYLGARD 184 (silicone elastomer kit) was purchased from Dow Corning, Tokyo, Japan. DMEM Medium, fetal bovine serum (FBS), penicillin-streptomycin (10,000 U/mL), and trypsin (0.25%) were supplied from GIBCO (USA). 3-(4, 5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) and dimethyl sulfoxide (DMSO) were purchased from Merck (Germany).
PDMS fabrication
Three compositions of precursor and curing agent were mixed and the samples of S1, S2, and S3 with the ratio of 2.5, 5, and 10 bases were prepared, respectively. In the procedure of PDMS fabrication, following the mechanical stirring each sample was degassed under vacuum for 20 min and the mixture was poured into the polystyrene mold and cured at 75 °C for 24 h. The circular shape of platforms with the dimension of 20 × 4 mm was taken for atomic force microscopy analysis and cell culture evaluations.
Surface plasma treatment
To gain assorted roughness in PDMS substrates, SDBD plasma (Iran, Shahid Beheshti University) was applied. The proportion of base to curing agent for plasma treatment was set at 10:1 and the plasma power and electrode distances were 30 W and 2 mm, respectively. Different roughness in the PDMS surface was accomplished by different processing durations of 30, 90, and 180 s (R2, R3, and R4). The samples without any plasma exposure were selected as control (R1).
Stiffness evaluation
The bulk elasticity was measured by the tensile test (INSTRON 5566, United State). The substrates were cut into 30 × 6 mm in a rectangular shape and the test rate was set at 0.1 mm s-1.
Roughness characterization
Surface topography was analyzed by atomic force microscopy (AFM) (Nano wizard II, Germany) using none- contact (tapping) mode in the air and a frequency of 113 kHz. Each exposure time was repeated for three samples and the average of quantitative root mean square roughness was reported.
Cell Survival Assay
A549 adenocarcinoma human alveolar basal epithelial cells (1 × 104 cells) were grown in DMEM medium, supplemented with 10% (v/v) heat-inactivated fetal bovine serum, and 1% (v/v) = penicillin and streptomycin. The cells were maintained at 37 °C in a humidified atmosphere containing 5% CO2 for 22 h. A ratio of adhered live cells was calculated by MTT assay. In this assay, the yellow tetrazolium salt (MTT) is reduced to the purple formazan dye by mitochondrial dehydrogenases in live cells. Briefly, the culture medium was replaced with fresh medium containing MTT solution (final concentration 0.5 mg/mL) and incubated for 4 h at 37 °C. Then the medium was removed and 500 μL DMSO was added to each well and mixed properly until blue formazan product completely dissolved. Absorbance was measured at the wavelength of 570 against 630 nm as the reference wavelength in an automated plate reader (BIOTEK).
Calculation of Attached Cells Surface on PDMS
The image processing method has been used to calculate the percentage of PDMS surface coverage by A549 cells. To do so, the cell images of previously selected locations of PDMS growing surface were recorded at the same sizes of RGB in the values of 1200x1600x3 in jpg format. Computation MATLAB 2014b software (MATHWIRKS, Natick, MA, USA) has been used to run a subroutine on each picture.
Image enhancement (sharpening, deblurring, highlighting edges, improving image contrast, and removing noise) has been used to extract suitable features for a better result.
Lens effects on picture quality have been erased using the average color substitution method applied to the original picture. Next, RGB images or color maps conversion have been used to produce a grayscale image. A morphological structuring element has been created to identify background surfaces. Subtraction of the resulted image from the grayscale image has been performed for better discrimination of the cells from the background. Then, image adjustment has been applied to the resulted cell image using the proper mask filter. Afterward, the resulted grayscale image was converted to binary and filtered again to reduce noise and provide better recognition of the cells’ population. Using an appropriate threshold on the resulted picture, the number of white pixels was counted versus black pixels as the representation of the surface ratio was covered by the cells in that selected area of photography. Equation 1 has been used to calculate the percentages of cellular coverage on PDMS for any particular experiment:
(Equation 1)
The denominator of Equation 1 results in the number of all pixels in the selected Image. This equation is used for the calculation of
Figure 5.
Discrimination of detached cells and contribution of their cellular coverage
With the assumption that the attached cells are not circular and the detached ones are more likely to be in circle form, computation MATLAB 2014b software (MATHWORKS, Natick, MA, USA) has been used to identify the circularity of the cells’ picture using circular Hough transformation in the specified radius range and sensitivity. As a result, the circles were colored green and the cells being blue on the black background of the cell growth media. The software has then scanned all the pixels in different colors as the representation of total detached (circled in green) surface area versus total attached (colored in blue) cells surface area using Equation 2, which is used for the process of
Figure 6.
(Equation 2)
To consider and correct the results of the above equation for the variable sizes of circular detached cells, Equations 3 and 4 have been used to measure the mean space size for each photograph taken from pre-selected locations of cells on different PDMS samples;
(Equation 3)
(Equation 4)
Where Ri is the radius and Si is the surface area of the ith circle (in pixel) and is the number of circles in each image.
Statistical analysis
To compare the results, analysis of variance (one-way ANOVA by Graph Pad Software, USA) was performed. The significant difference was reported in the cases in which the p-value was <0.05.