All chemicals and culture media were purchased from the Merck and Sigma, Germany. The mushroom, Agaricus bisporus provided by a local market was originated from Malard city, central province of Iran. Column beds were purchased from Pharmacia Biotech., Uppsala Sweden. UV spectrometer Model 1501 manufacturer was Shimadzu, Japan. AE-6210 slab gel cast producer was Atto Corporation, Japan. Microplate reader, spectra model was from Tecan, Switzerland. Bacteria with various ATCC numbers were collected from the stock cultures of the Microbiological Lab, Faculty of Pharmacy, Shahid Beheshti University of Medical Sciences, Iran.The bacteria used were: Staphylococcus aureus, ATCC 6538; Bacillus subtilis, ATCC 6633; Escherichia coli, ATCC 8739; Pseudomonas aeruginosa, ATCC 9027 and methicillin-resistant Staphylococcus aureus (MRSA), ATCC 33591.
Methods
Extract preparation
The fruiting bodies of the mushroom (100 g) prewashed with distilled water were chopped into small pieces and homogenized in their two times volume of cold Tris buffer, 50 mM, pH 7.3 (containing 1.5% PVP , 1% vitamin C, 0.15 M NaCl ) and stirred for 2-3 h. The homogenate was then passed through a cheesecloth and centrifuged (4500 rpm, 30 min).The supernatant was made 70% saturation by ammonium sulphate, or added cold acetone (80% v/v) and left overnight in fridge (4° C). The proteinous precipitate was collected by centrifugation at 4000 × g for 20 min (10 g, wet weight) and stored in freezer until when it is used.
Column chromatography
Protein pellet (300 mg) was solubilized in 4 mL of Tris buffer, 0.1M, pH 7.3, and loaded on a Sephadex G-100 column (1.0 × 70 cm) previously equilibrated with Tris buffer. The column was washed with the same buffer and eluates were collected in 3 mL volumes at the flow rate of 40 mL/h and monitored by UV spectrometer at 280 nm.Three protein fractions were obtained as uv absorption dictated, and their purities were checked by SDS-PAGE. The protein content of each fraction was precipitated by adding cold acetone or ammonium sulphate (70 % saturation) and collected after centrifugation (4000 × g for 20 min). Protein fractions thus prepared were then redissolved in Tris buffer and used for the antibacterial activity test. Fraction 2 was further purified by subjecting to an ion-exchange chromatography column of DEAE Sephadex A-50. Elution condition was chosen as a stepwise salt gradient .
Protein detection and determination
Sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) was performed on the crud protein extract as well as those protein fractions collected from the two chromatography columns, using the method of Laemmli and Favere (
11).
Molecular weights of the protein samples were determined by comparison with the molecular mass marker proteins. The protein content of each fraction was calculated by the method of Bradford (
12) using BSA as the standard protein.
Assay of antibacterial activity
Antibacterial activity of
Agaricus bisporus protein extract and its fractions was examined against several species of g- and g+ bacteria. The antibacterial test was carried out by the 96-well microplate-based broth dilution method (
13). Moller Hilton Broth was used as the liquid culture media for bacteria. Primary bacterial suspension for microplate test was made as 106cfu/mL concentration in MHB (
14). The primary protein sample was prepared as 3.2 mg/mL concentration in MBH.
Preparing the microplate.:100 μL MBH was added to the each well of columns 2-6.
The wells of columns 1, 2 and 8 were then filled each by 100 μL protein sample. Following mixing, 100 μL protein sample, as 2 times diluted in the wells of column 2 was transferred from column 2 to 3. Again, 100 μL diluted protein sample from column 3 was transferred to column 4 and the process of sample dilution was continued for column 5. From column 5, 100 μL sample was taken and discarded. Now, 100 μL bacterial suspension, prepared as above, was added to the each well of columns 1-6. Column 6 was considered as the bacterial growth control. Column 7 was filled with 200 μL MBH and column 8 was prepared with 200 μL protein sample, in order to be considered as the medium sterility and protein sample sterility controls, respectively. Finally, column 9 was constructed by 100 μL MBH containing Amikacin (32 μg/mL) plus 100 μL bacterial suspension, as a positive antibiotic marker control. It should be mentioned that each row of the microplate prepared as above was allocated to one strain of microorganisms. The microplate was then covered and protected from dehydration with a plastic bag and incubated at 30-35º C for 24-72 h. The amount of microbial growth was measured at time intervals at 570 nm absorbance by the Elisa reader
Determining IC%
The percentage of inhibitory concentration of the mushroom protein samples was determined according to the formula as follows;
Where ODw is the absorption of the bacterial growth control, ODc is the absorption of sample containing only protein as a control, and ODa is the absorption of bacterial suspensions containing different amounts of mushroom protein.